RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 SLC6A18Q96N87 628 aa2.63□□□□□ -1.99
VPS54-202ENST00000354504 KCTD10Q9H3F6 313 aa2.63□□□□□ -1.99
VPS54-202ENST00000354504 ADAM30Q9UKF2 790 aa2.63□□□□□ -1.99
VPS54-202ENST00000354504 PCDHA5Q9Y5H7 936 aa2.63□□□□□ -1.99
VPS54-202ENST00000354504 ACTL7BQ9Y614 415 aa2.63□□□□□ -1.99
VPS54-202ENST00000354504 KIF26AQ9ULI4 1882 aaPredicted RBP2.63□□□□□ -1.99
VPS54-202ENST00000354504 FZD9O00144 591 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 EPHB6O15197 1021 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 TEX33O43247 280 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 PLA2G6O60733 806 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 IMPDH2P12268 514 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 PLCG1P19174 1290 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 GUCY2CP25092 1073 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 AMPD2Q01433 879 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 PTPN21Q16825 1174 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 FAM209AQ5JX71 171 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 STRIP1Q5VSL9 837 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 PRAMEF13Q5VWM6 474 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 NLRC3Q7RTR2 1065 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 VSTM4Q8IW00 320 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 FAM184AQ8NB25 1140 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 WDR66Q8TBY9 1149 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 TGFBRAP1Q8WUH2 860 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 CLEC4DQ8WXI8 215 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 ISL2Q96A47 359 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 MASTLQ96GX5 879 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 WNK4Q96J92 1243 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 PRMT6Q96LA8 375 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 MPHOSPH8Q99549 860 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 GLIS2Q9BZE0 524 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 CCSER1Q9C0I3 900 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 SEMA6BQ9H3T3 888 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 COL20A1Q9P218 1284 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 AJAP1Q9UKB5 411 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 SYNPO2Q9UMS6 1093 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 TDRD15B5MCY1 1934 aaKnown RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 MYO16Q9Y6X6 1858 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 ZFHX4Q86UP3 3567 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 SCN1AP35498 2009 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 SCN10AQ9Y5Y9 1956 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 ITIH6Q6UXX5 1313 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 VPS37CA5D8V6 355 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 PRR33A8MZF0 331 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 MEFVO15553 781 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 RHOBTB3O94955 611 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 LETM1O95202 739 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 CAPNS1P04632 268 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 GYPCP04921 128 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 MMP10P09238 476 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 SLFN14P0C7P3 912 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 PTGS1P23219 599 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 MARCKSP29966 332 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 CHRNA4P43681 627 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 PREPP48147 710 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 GYS2P54840 703 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 SLC12A3P55017 1021 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 ERVK-24P63145 666 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 WTAPQ15007 396 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 KIF4BQ2VIQ3 1234 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 ZBTB37Q5TC79 503 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 ARL6IP4Q66PJ3 421 aaKnown RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 KIAA1211LQ6NV74 962 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 CDPF1Q6NVV7 123 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 KRTAP19-1Q8IUB9 90 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 FAM178BQ8IXR5 827 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 GIMAP8Q8ND71 665 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 KCNG4Q8TDN1 519 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 GJA10Q969M2 543 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 RBM17Q96I25 401 aaKnown RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 C8orf76Q96K31 380 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 UBL7Q96S82 380 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 TMPRSS13Q9BYE2 586 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 CCDC113Q9H0I3 377 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 NAPBQ9H115 298 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 NUP62CLQ9H1M0 184 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 RANBP17Q9H2T7 1088 aaKnown RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 PDLIM7Q9NR12 457 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 TMEM260Q9NX78 707 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 LIMA1Q9UHB6 759 aaKnown RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 SIK3Q9Y2K2 1263 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 TMA7Q9Y2S6 64 aaKnown RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 RANBP2P49792 3224 aaKnown RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 BSNQ9UPA5 3926 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 LAMA1P25391 3075 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 GOLGA8AA7E2F4 631 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 FAM86B1E9PN63 330 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 ECE2O60344 883 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 PGRP06401 933 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 CYP3A4P08684 503 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 FAM86B2P0C5J1 330 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 ZSCAN20P17040 1043 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 CIITAP33076 1130 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 CD68P34810 354 aaPredicted RBP2.62□□□□□ -1.99
VPS54-202ENST00000354504 RFC4P35249 363 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 TRAPPC10P48553 1259 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 TFAP4Q01664 338 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 PPP2R3AQ06190 1150 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 GOLGA8FQ08AF8 430 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 GOLGA8DPQ0D2H9 430 aa2.62□□□□□ -1.99
VPS54-202ENST00000354504 ZNF460Q14592 562 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms