RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 CHMP2BQ9UQN3 213 aa18.09■□□□□ 0.49
ARFGAP1-201ENST00000353546 UTP11Q9Y3A2 253 aaKnown RBP18.09■□□□□ 0.49
ARFGAP1-201ENST00000353546 SMARCA1P28370 1054 aa18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 CERKLQ49MI3 558 aaPredicted RBP18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 KHDC1Q4VXA5 237 aaKnown RBP18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 OTUD6AQ7L8S5 288 aa18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 COL23A1Q86Y22 540 aaPredicted RBP18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 GDAP1Q8TB36 358 aa18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 ARHGEF1Q92888 912 aaKnown RBP18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 SLC35B4Q969S0 331 aa18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 CRAMP1Q96RY5 1269 aa18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 GPCPD1Q9NPB8 672 aa18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 TXLNGQ9NUQ3 528 aa18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 COL16A1Q07092 1604 aaPredicted RBP18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 LTBP4Q8N2S1 1624 aa18.08■□□□□ 0.49
ARFGAP1-201ENST00000353546 TPD52L2O43399 206 aaKnown RBP18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 LDHCP07864 332 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 SKIP12755 728 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 ZNF24P17028 368 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 USP11P51784 963 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 ARL10Q8N8L6 244 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 HAPLN3Q96S86 360 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 RTFDC1Q9BY42 306 aaPredicted RBP18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 KLHL14Q9P2G3 628 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 PDP2Q9P2J9 529 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 NR2E1Q9Y466 385 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 TMEM221A6NGB7 291 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 MARCH6O60337 910 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 GFPT2O94808 682 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 ZBTB48P10074 688 aaPredicted RBP18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 UBE2SQ16763 222 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 ZNF365Q70YC5 407 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 TRIM59Q8IWR1 403 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 AGGF1Q8N302 714 aaeCLIP18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 ERP27Q96DN0 273 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 HIC2Q96JB3 615 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 SEMA4AQ9H3S1 761 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 ZDHHC18Q9NUE0 388 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 SLC4A7Q9Y6M7 1214 aa18.08■□□□□ 0.48
ARFGAP1-201ENST00000353546 FOXO6A8MYZ6 492 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 TMCC1O94876 653 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 GH1P01241 217 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 ASIC2Q16515 512 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 FOXR2Q6PJQ5 311 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 KIAA1683Q9H0B3 1180 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 BMP2KQ9NSY1 1161 aaPredicted RBP18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 USP20Q9Y2K6 914 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 NPHP3-ACAD11A0A0J9YXS1 232 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 EPS15P42566 896 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 PLOD1Q02809 727 aaPredicted RBP18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 CBX3Q13185 183 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 C6orf118Q5T5N4 469 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 MFSD4BQ5TF39 518 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 VSIG1Q86XK7 387 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 ANKRD42Q8N9B4 389 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 SLC7A6OSQ96CW6 309 aaPredicted RBP18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 CEP63Q96MT8 703 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 DCLRE1BQ9H816 532 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 STOML1Q9UBI4 398 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 MROH7Q68CQ1 1323 aa18.07■□□□□ 0.48
ARFGAP1-201ENST00000353546 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 TMEM120BA0PK00 339 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 CES2O00748 559 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 PLTPP55058 493 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 AUHQ13825 339 aaKnown RBP18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 CCDC6Q16204 474 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 RNF43Q68DV7 783 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 HAS1Q92839 578 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 SLITRK6Q9H5Y7 841 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 AIPL1Q9NZN9 384 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 DDX25Q9UHL0 483 aaKnown RBP18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 NAV1Q8NEY1 1877 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 E9PMD0 336 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 CCDC188H7C350 402 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 RTP1P59025 263 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 POU5F1Q01860 360 aaKnown RBP18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 SPDYCQ5MJ68 293 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 WASHC2DQ5SRD0 308 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 RFWD3Q6PCD5 774 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 SPATA31A5Q5VU36 1347 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 SPATA31A7Q8IWB4 1347 aa18.06■□□□□ 0.48
ARFGAP1-201ENST00000353546 COPB2P35606 906 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 SLC16A2P36021 539 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 OCRLQ01968 901 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 KLRC3Q07444 240 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 HERC4Q5GLZ8 1057 aaPredicted RBP18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 DUS1LQ6P1R4 473 aaKnown RBP18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 ZNF449Q6P9G9 518 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 DAAM2Q86T65 1068 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 SMC1BQ8NDV3 1235 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 CCDC166P0CW27 439 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 ACTN1P12814 892 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 HOXA7P31268 230 aaPredicted RBP18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 PTK2Q05397 1052 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 GIT2Q14161 759 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 TNFAIP8L3Q5GJ75 292 aa18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 MEX3CQ5U5Q3 659 aaKnown RBP18.05■□□□□ 0.48
ARFGAP1-201ENST00000353546 FBXO25Q8TCJ0 367 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms