RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 MFN1Q8IWA4 741 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 CCDC65Q8IXS2 484 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 AFAP1Q8N556 730 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 OTUD6BQ8N6M0 293 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 PDCD7Q8N8D1 485 aaKnown RBP6.41□□□□□ -1.38
RFC1-201ENST00000349703 FUCA2Q9BTY2 467 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 NUF2Q9BZD4 464 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 INTS10Q9NVR2 710 aaKnown RBP6.41□□□□□ -1.38
RFC1-201ENST00000349703 SETBP1Q9Y6X0 1596 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 ANO9A1A5B4 782 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 PTPDC1A2A3K4 754 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 H0Y626 953 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 MEIS2O14770 477 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 CCNT1O60563 726 aaKnown RBP6.41□□□□□ -1.38
RFC1-201ENST00000349703 IL1AP01583 271 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 COL6A2P12110 1019 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 PPFIA1Q13136 1202 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 EDRF1Q3B7T1 1238 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D25Q3MII6 688 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 EGFLAMQ63HQ2 1017 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 SCYL2Q6P3W7 929 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 ESPNLQ6ZVH7 1005 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 BEND5Q7L4P6 421 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 NLRC3Q7RTR2 1065 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 BTLAQ7Z6A9 289 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 RALYLQ86SE5 291 aaKnown RBP6.41□□□□□ -1.38
RFC1-201ENST00000349703 KCT2Q8NC54 265 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 KCNJ9Q92806 393 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 MYO6Q9UM54 1294 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 TET3O43151 1660 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 RPS6KB1P23443 525 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 IARSP41252 1262 aaKnown RBP6.41□□□□□ -1.38
RFC1-201ENST00000349703 IGSF11Q5DX21 431 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 IFNL3Q8IZI9 196 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 SRBD1Q8N5C6 995 aaKnown RBP6.41□□□□□ -1.38
RFC1-201ENST00000349703 ST7LQ8TDW4 575 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 ANKRD24Q8TF21 1146 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 ZC3HAV1LQ96H79 300 aaKnown RBP6.41□□□□□ -1.38
RFC1-201ENST00000349703 TINF2Q9BSI4 451 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 NACAP1Q9BZK3 213 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 ETNK1Q9HBU6 452 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 KCND1Q9NSA2 647 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 TESQ9UGI8 421 aaKnown RBP6.41□□□□□ -1.38
RFC1-201ENST00000349703 POLG2Q9UHN1 485 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 VPS28Q9UK41 221 aa6.41□□□□□ -1.38
RFC1-201ENST00000349703 CD109Q6YHK3 1445 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 ARHGEF10O15013 1369 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TSC22D2O75157 780 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 WHAMMP3Q1A5X7 153 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 LONRF2Q1L5Z9 754 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 PAOXQ6QHF9 649 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 HDAC10Q969S8 669 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 RADILQ96JH8 1075 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 ACAT2Q9BWD1 397 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 L2HGDHQ9H9P8 463 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 LATS2Q9NRM7 1088 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 SLC52A1Q9NWF4 448 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 KIF1BO60333 1816 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TTC21BQ7Z4L5 1316 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3DA0A087WVF3 549 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3IA0A087WXS9 549 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3EA0A087X179 549 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3KA0A087X1G2 549 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3BA6NDS4 549 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3FA6NER0 549 aaPredicted RBP6.4□□□□□ -1.38
RFC1-201ENST00000349703 A6NL46 340 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3LB9A6J9 549 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 AKAP10O43572 662 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 COQ9O75208 318 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 PPFIA4O75335 1185 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 ADH1AP07327 375 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3HP0C7X1 549 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 SYN1P17600 705 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 ERCC2P18074 760 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 SKIV2L2P42285 1042 aaKnown RBP6.4□□□□□ -1.38
RFC1-201ENST00000349703 C2orf27AQ580R0 203 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 KHDC1LQ5JSQ8 128 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3GQ6DHY5 549 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3CQ6IPX1 549 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 CDH24Q86UP0 819 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 TBC1D3Q8IZP1 549 aaPredicted RBP6.4□□□□□ -1.38
RFC1-201ENST00000349703 DIO2Q92813 273 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 PTERQ96BW5 349 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 C8orf76Q96K31 380 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 CENPHQ9H3R5 247 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 ADAM21Q9UKJ8 722 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 CYP8B1Q9UNU6 501 aa6.4□□□□□ -1.38
RFC1-201ENST00000349703 GTPBP1O00178 669 aaKnown RBP6.4□□□□□ -1.39
RFC1-201ENST00000349703 ZNF213O14771 459 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 DYNC1LI2O43237 492 aaPredicted RBP6.4□□□□□ -1.39
RFC1-201ENST00000349703 ZNF853P0CG23 659 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 ALOX15P16050 662 aaPredicted RBP6.4□□□□□ -1.39
RFC1-201ENST00000349703 ZNF37AP17032 561 aaPredicted RBP6.4□□□□□ -1.39
RFC1-201ENST00000349703 CDC25AP30304 524 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 GRK3P35626 688 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 FMR1Q06787 632 aaKnown RBP eCLIP6.4□□□□□ -1.39
RFC1-201ENST00000349703 RASGRF1Q13972 1273 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 ARMC9Q7Z3E5 817 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 TAF4BQ92750 862 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 RMDN1Q96DB5 314 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms