RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 HPDP32754 393 aaPredicted RBP23.04■■□□□ 1.28
PTPN18-202ENST00000347849 FNTAP49354 379 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 ACTR2P61160 394 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 RNF187Q5TA31 235 aaPredicted RBP23.04■■□□□ 1.28
PTPN18-202ENST00000347849 SPATS2Q86XZ4 545 aaKnown RBP23.04■■□□□ 1.28
PTPN18-202ENST00000347849 PTPRFP10586 1907 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 MAFGO15525 162 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 FMO5P49326 533 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 KLHL30Q0D2K2 578 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 HLTFQ14527 1009 aaKnown RBP eCLIP23.03■■□□□ 1.28
PTPN18-202ENST00000347849 EMC10Q5UCC4 262 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 USP38Q8NB14 1042 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 ANKEF1Q9NU02 776 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 SLC9A2Q9UBY0 812 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 FRMD4BQ9Y2L6 1034 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 PCDHGC5Q9Y5F6 944 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 PTK2Q05397 1052 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 MICALCLQ6ZW33 695 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 NLRP14Q86W24 1093 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 PROCA1Q8NCQ7 364 aaPredicted RBP23.03■■□□□ 1.28
PTPN18-202ENST00000347849 CDCA5Q96FF9 252 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 CEP170P1Q96L14 293 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 PAGR1Q9BTK6 254 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 MKNK1Q9BUB5 465 aa23.03■■□□□ 1.28
PTPN18-202ENST00000347849 USP8P40818 1118 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 GTF2BQ00403 316 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 ASIC2Q16515 512 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 SEPT14Q6ZU15 432 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 CYFIP1Q7L576 1253 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 ZNF571Q7Z3V5 609 aaPredicted RBP23.02■■□□□ 1.28
PTPN18-202ENST00000347849 SPAG5Q96R06 1193 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 PFASO15067 1338 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 PAPPA2Q9BXP8 1791 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 HMGB1P1B2RPK0 211 aaPredicted RBP23.02■■□□□ 1.28
PTPN18-202ENST00000347849 E7EVH7 732 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 KCNK3O14649 394 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 TNNC1P63316 161 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 KCTD19Q17RG1 926 aaPredicted RBP23.02■■□□□ 1.28
PTPN18-202ENST00000347849 ABHD15Q6UXT9 468 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 MYCBPAPQ8TBZ2 947 aa23.02■■□□□ 1.28
PTPN18-202ENST00000347849 PPANQ9NQ55 473 aaKnown RBP23.02■■□□□ 1.28
PTPN18-202ENST00000347849 GEMIN8Q9NWZ8 242 aaKnown RBP23.02■■□□□ 1.28
PTPN18-202ENST00000347849 CCDC169A6NNP5 214 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 FSBPO95073 299 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 NPTX2P47972 431 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 PTPROQ16827 1216 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 NCAPG2Q86XI2 1143 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 SLC9A9Q8IVB4 645 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 PLEKHO2Q8TD55 490 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 TAF4BQ92750 862 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 ACCSQ96QU6 501 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 NCAPGQ9BPX3 1015 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 ATXN2Q99700 1313 aaKnown RBP23.01■■□□□ 1.27
PTPN18-202ENST00000347849 PCNTO95613 3336 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 LOXHD1Q8IVV2 1947 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 A0A0G2JLL6 359 aaPredicted RBP23.01■■□□□ 1.27
PTPN18-202ENST00000347849 NCKAP1LP55160 1127 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 BFSP1Q12934 665 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 PRRT2Q7Z6L0 340 aaPredicted RBP23.01■■□□□ 1.27
PTPN18-202ENST00000347849 GPATCH11Q8N954 259 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 CHST13Q8NET6 341 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 OR2W6PQ8NHA6 318 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 SPATC1LQ9H0A9 340 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 GOLPH3Q9H4A6 298 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 TAF1DQ9H5J8 278 aaPredicted RBP23.01■■□□□ 1.27
PTPN18-202ENST00000347849 TXNRD2Q9NNW7 524 aa23.01■■□□□ 1.27
PTPN18-202ENST00000347849 GOLGA8IPA6NC78 632 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 SOWAHBA6NEL2 793 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 GOLGA6L10A6NI86 522 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 GOLGA8JA6NMD2 632 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 ANKRD63C9JTQ0 380 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 MAPTP10636 758 aaKnown RBP23■■□□□ 1.27
PTPN18-202ENST00000347849 ATP4AP20648 1035 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 HSPA9P38646 679 aaKnown RBP23■■□□□ 1.27
PTPN18-202ENST00000347849 IREB2P48200 963 aaKnown RBP23■■□□□ 1.27
PTPN18-202ENST00000347849 JAM2P57087 298 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 IFT88Q13099 833 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 TTLL12Q14166 644 aaPredicted RBP23■■□□□ 1.27
PTPN18-202ENST00000347849 TMEM161BQ8NDZ6 487 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 RDM1Q8NG50 284 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 CABS1Q96KC9 395 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 TMBIM4Q9HC24 238 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 XPNPEP1Q9NQW7 623 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 ADGRA3Q8IWK6 1321 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 CNMDO75829 334 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 ADSSP30520 456 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 ALDH5A1P51649 535 aaPredicted RBP23■■□□□ 1.27
PTPN18-202ENST00000347849 ERVK-9P63128 1117 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 PRKCEQ02156 737 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 RPS6KA1Q15418 735 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 STXBP2Q15833 593 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 DDX42Q86XP3 938 aaKnown RBP eCLIP23■■□□□ 1.27
PTPN18-202ENST00000347849 RIOX2Q8IUF8 465 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 ASCC2Q9H1I8 757 aaPredicted RBP23■■□□□ 1.27
PTPN18-202ENST00000347849 TMEM206Q9H813 350 aa23■■□□□ 1.27
PTPN18-202ENST00000347849 SEPT9Q9UHD8 586 aaPredicted RBP23■■□□□ 1.27
PTPN18-202ENST00000347849 CLSTN1O94985 981 aa22.99■■□□□ 1.27
PTPN18-202ENST00000347849 PSAPP07602 524 aa22.99■■□□□ 1.27
PTPN18-202ENST00000347849 C1orf220Q5T0J3 134 aa22.99■■□□□ 1.27
PTPN18-202ENST00000347849 EEPD1Q7L9B9 569 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms