RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ADAMTS4O75173 837 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 ADRB2P07550 413 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 TPM1P09493 284 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 CCND3P30281 292 aaPredicted RBP11.97□□□□□ -0.49
ECM1-201ENST00000346569 HNRNPH3P31942 346 aaKnown RBP11.97□□□□□ -0.49
ECM1-201ENST00000346569 FMO5P49326 533 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 LIG4P49917 911 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 VAMP7P51809 220 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 ZBED6P86452 979 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 MAPK6Q16659 721 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 TCERG1LQ5VWI1 586 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 CCSAPQ6IQ19 270 aaPredicted RBP11.97□□□□□ -0.49
ECM1-201ENST00000346569 CRELD2Q6UXH1 353 aaPredicted RBP11.97□□□□□ -0.49
ECM1-201ENST00000346569 CBWD2Q8IUF1 395 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 ZBTB8OSQ8IWT0 167 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 GPD1LQ8N335 351 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 TMC2Q8TDI7 906 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 ZNF296Q8WUU4 475 aaPredicted RBP11.97□□□□□ -0.49
ECM1-201ENST00000346569 LMBR1Q8WVP7 490 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 ERO1AQ96HE7 468 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 BAG1Q99933 345 aaPredicted RBP11.97□□□□□ -0.49
ECM1-201ENST00000346569 CRACR2AQ9BSW2 395 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 KIAA1586Q9HCI6 787 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 PTPRHQ9HD43 1115 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 RRAGDQ9NQL2 400 aaPredicted RBP11.97□□□□□ -0.49
ECM1-201ENST00000346569 ABHD10Q9NUJ1 306 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 EVPLQ92817 2033 aa11.97□□□□□ -0.49
ECM1-201ENST00000346569 A0A087WZ62 844 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 P4HA2O15460 535 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 EXTL3O43909 919 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 TOM1L1O75674 476 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 LDHAP00338 332 aaKnown RBP11.96□□□□□ -0.49
ECM1-201ENST00000346569 PGK1P00558 417 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 HMGCRP04035 888 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 PRKCBP05771 671 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 C6orf222P0C671 652 aaPredicted RBP11.96□□□□□ -0.49
ECM1-201ENST00000346569 IQCF3P0C7M6 154 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 RARBP10826 455 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 KRT13P13646 458 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.49
ECM1-201ENST00000346569 TRIM21P19474 475 aaKnown RBP11.96□□□□□ -0.49
ECM1-201ENST00000346569 SLC9A1P19634 815 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 PROZP22891 400 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 PON1P27169 355 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 PRMT2P55345 433 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 DLG4P78352 724 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 CLDN10P78369 228 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 CDC42EP1Q00587 391 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 MBTD1Q05BQ5 628 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 ARHGEF6Q15052 776 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 SNRNP35Q16560 246 aaKnown RBP11.96□□□□□ -0.49
ECM1-201ENST00000346569 AMHR2Q16671 573 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 EXOC3L4Q17RC7 722 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 GNASQ5JWF2 1037 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 NFRKBQ6P4R8 1299 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 WDR59Q6PJI9 974 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 GBP6Q6ZN66 633 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 TSHZ1Q6ZSZ6 1077 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 LMO3Q8TAP4 145 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 BAP1Q92560 729 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 SAAL1Q96ER3 474 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 BICD1Q96G01 975 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 NLRP4Q96MN2 994 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 FDXACB1Q9BRP7 624 aaPredicted RBP11.96□□□□□ -0.49
ECM1-201ENST00000346569 KATNAL1Q9BW62 490 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 NAA15Q9BXJ9 866 aaKnown RBP11.96□□□□□ -0.49
ECM1-201ENST00000346569 MRPL4Q9BYD3 311 aaKnown RBP11.96□□□□□ -0.49
ECM1-201ENST00000346569 GANQ9H2C0 597 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 ADAMTS10Q9H324 1103 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 SPC25Q9HBM1 224 aa11.96□□□□□ -0.49
ECM1-201ENST00000346569 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.49
ECM1-201ENST00000346569 CASP8AP2Q9UKL3 1982 aa11.96□□□□□ -0.5
ECM1-201ENST00000346569 ZNF233A6NK53 670 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 ARHGAP6O43182 974 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 FAM189A1O60320 539 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 GPR32O75388 356 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 CAPN15O75808 1086 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 VTNP04004 478 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 TRIM49P0CI25 452 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 TRIM49CP0CI26 452 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 CST5P28325 142 aaPredicted RBP11.95□□□□□ -0.5
ECM1-201ENST00000346569 PHKA2P46019 1235 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 GPC3P51654 580 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 NLRP11P59045 1033 aaKnown RBP11.95□□□□□ -0.5
ECM1-201ENST00000346569 MCL1Q07820 350 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 CYP24A1Q07973 514 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 PPP3CAQ08209 521 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.5
ECM1-201ENST00000346569 MEA1Q16626 185 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 CBWD6Q4V339 395 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 DCAF17Q5H9S7 520 aaPredicted RBP11.95□□□□□ -0.5
ECM1-201ENST00000346569 CBWD3Q5JTY5 395 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 CBWD5Q5RIA9 395 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 KLHDC7AQ5VTJ3 777 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 ZNF410Q86VK4 478 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 NEK11Q8NG66 645 aa11.95□□□□□ -0.5
ECM1-201ENST00000346569 ZNF668Q96K58 619 aaPredicted RBP11.95□□□□□ -0.5
ECM1-201ENST00000346569 PCMTD1Q96MG8 357 aaPredicted RBP11.95□□□□□ -0.5
ECM1-201ENST00000346569 MTG1Q9BT17 334 aaPredicted RBP11.95□□□□□ -0.5
ECM1-201ENST00000346569 SIX2Q9NPC8 291 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms