RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PHLDB3Q6NSJ2 640 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 SCYL3Q8IZE3 742 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 SLC10A4Q96EP9 437 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 PRM3Q9NNZ6 103 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 PLS3P13797 630 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 ADCY8P40145 1251 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 STAT5BP51692 787 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 EFCC1Q9HA90 598 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 ATP6V0A4Q9HBG4 840 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 HOXC10Q9NYD6 342 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 TTLL3Q9Y4R7 772 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 KIF4AO95239 1232 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 LMNB1P20700 586 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 GUCY1A3Q02108 690 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 NNTQ13423 1086 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 ZKSCAN8Q15776 578 aaPredicted RBP14.32□□□□□ -0.12
CASC4-202ENST00000345795 Q4G0T1 1027 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 RSRC2Q7L4I2 434 aaKnown RBP14.32□□□□□ -0.12
CASC4-202ENST00000345795 TRIM7Q9C029 511 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 FHDC1Q9C0D6 1143 aaPredicted RBP14.32□□□□□ -0.12
CASC4-202ENST00000345795 AGO2Q9UKV8 859 aaKnown RBP14.32□□□□□ -0.12
CASC4-202ENST00000345795 IGLV3-22A0A075B6J6 115 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 VIMP08670 466 aaKnown RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 TXNP10599 105 aaKnown RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 KRT76Q01546 638 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 VGLL4Q14135 290 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 SEPT7Q16181 437 aaKnown RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 EDRF1Q3B7T1 1238 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 FOXR1Q6PIV2 292 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 ZNF365Q70YC5 407 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 LRRN4Q8WUT4 740 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 RNPC3Q96LT9 517 aaKnown RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 GGT7Q9UJ14 662 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 MYH6P13533 1939 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 MYH10P35580 1976 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 GABPB1Q06547 395 aaPredicted RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 ZBTB41Q5SVQ8 909 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 ARL8AQ96BM9 186 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 NOVA2Q9UNW9 492 aaKnown RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 NID2Q14112 1375 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 TBX3O15119 743 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 ADRB2P07550 413 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 TCF7P36402 384 aaPredicted RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 NFX1Q12986 1120 aaKnown RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 DRP2Q13474 957 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 CEP120Q8N960 986 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 POLR3CQ9BUI4 534 aaPredicted RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 MOV10L1Q9BXT6 1211 aaKnown RBP14.31□□□□□ -0.12
CASC4-202ENST00000345795 ZNF148Q9UQR1 794 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 PLAAQ9Y263 795 aa14.31□□□□□ -0.12
CASC4-202ENST00000345795 VGLL3A8MV65 326 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 OPA1O60313 960 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 LIG3P49916 1009 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 ZNF568Q3ZCX4 644 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 CYP4A22Q5TCH4 519 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 ANO5Q75V66 913 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 CPLX4Q7Z7G2 160 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 LPAR1Q92633 364 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 AGPAT1Q99943 283 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 C10orf88Q9H8K7 445 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 TBX20Q9UMR3 447 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 F8VZ95 297 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 EMC2Q15006 297 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 WDR72Q3MJ13 1102 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 KRT39Q6A163 491 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 CREG2Q8IUH2 290 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 ZNF564Q8TBZ8 553 aaPredicted RBP14.3□□□□□ -0.12
CASC4-202ENST00000345795 KRT35Q92764 455 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 CALN1Q9BXU9 219 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 MTUS1Q9ULD2 1270 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 DAAM1Q9Y4D1 1078 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 KLRG2A4D1S0 409 aaPredicted RBP14.3□□□□□ -0.12
CASC4-202ENST00000345795 RGL2O15211 777 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 MYZAPP0CAP1 466 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 COMTP21964 271 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 HOXD13P35453 343 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 YARSP54577 528 aaKnown RBP14.3□□□□□ -0.12
CASC4-202ENST00000345795 SPIRE1Q08AE8 756 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 CACNA1SQ13698 1873 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 SV2AQ7L0J3 742 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 FBXL13Q8NEE6 735 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 GOLGA5Q8TBA6 731 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 BSNDQ8WZ55 320 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 TMEM117Q9H0C3 514 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 RANBP17Q9H2T7 1088 aaKnown RBP14.3□□□□□ -0.12
CASC4-202ENST00000345795 CALCOCO1Q9P1Z2 691 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 ALG6Q9Y672 507 aa14.3□□□□□ -0.12
CASC4-202ENST00000345795 LRRD1A4D1F6 860 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 VTNP04004 478 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 ZNF286BP0CG31 522 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 RAP1GAPP47736 663 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 NLRP11P59045 1033 aaKnown RBP14.29□□□□□ -0.12
CASC4-202ENST00000345795 LRRC14Q15048 493 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 SGO2Q562F6 1265 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 C10orf76Q5T2E6 689 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 C9orf131Q5VYM1 1079 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 MMS22LQ6ZRQ5 1243 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 SLC38A10Q9HBR0 1119 aa14.29□□□□□ -0.12
CASC4-202ENST00000345795 ADAM22Q9P0K1 906 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms