RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 A0A1W2PQ27 194 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 A0A1W2PQ64 194 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 A0A1W2PQD8 194 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 FRMD3A2A2Y4 597 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 EPOPA6NHQ4 379 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 SLC16A4O15374 487 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TRAK2O60296 914 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 LPXNO60711 386 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 OFD1O75665 1012 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GATMP50440 423 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ADGRE1Q14246 886 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 DHX8Q14562 1220 aaKnown RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 DCAF4L1Q3SXM0 396 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ZPBP2Q6X784 338 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 AGMOQ6ZNB7 445 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TAS1R3Q7RTX0 852 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 SPRED2Q7Z698 418 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 DNAJC19Q96DA6 116 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 FIZ1Q96SL8 496 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 EIF2AQ9BY44 585 aaKnown RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MRPL4Q9BYD3 311 aaKnown RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TRIM6Q9C030 488 aaPredicted RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PDZD7Q9H5P4 517 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CWH43Q9H720 699 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 RSAD1Q9HA92 442 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PTPRHQ9HD43 1115 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TYW1Q9NV66 732 aaKnown RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GBF1Q92538 1859 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MYMKA6NI61 221 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ITGA4P13612 1032 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GAP43P17677 238 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 LAG3P18627 525 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 STRN3Q13033 797 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PAN2Q504Q3 1202 aaKnown RBP14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 NOMO2Q5JPE7 1267 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 NT5DC1Q5TFE4 455 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ATF7IP2Q5U623 682 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 HAUS6Q7Z4H7 955 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MYCT1Q8N699 235 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PDILTQ8N807 584 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 RNF169Q8NCN4 708 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 HELQQ8TDG4 1101 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ACO2Q99798 780 aaKnown RBP14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PANK2Q9BZ23 570 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 LMAN2LQ9H0V9 348 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CERS4Q9HA82 394 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 OLFML3Q9NRN5 406 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 USP25Q9UHP3 1055 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 KCNH3Q9ULD8 1083 aa14.38□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GTPBP6O43824 516 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 EDN1P05305 212 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PROZP22891 400 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CTNNB1P35222 781 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GTF2BQ00403 316 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 LRRC55Q6ZSA7 311 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 FAM178BQ8IXR5 827 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 URGCPQ8TCY9 931 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MTUS1Q9ULD2 1270 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 HPSEQ9Y251 543 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PCDHB12Q9Y5F1 795 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MTCH2Q9Y6C9 303 aa14.37□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MEIS3P2A8K0S8 358 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 POLR2DO15514 142 aaKnown RBP14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TOM1L1O75674 476 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 NPTXRO95502 500 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PIGRP01833 764 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PPM1AP35813 382 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 UBE3AQ05086 875 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GPM6BQ13491 265 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PTPROQ16827 1216 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 LPPQ93052 612 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 DHX58Q96C10 678 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 HVCN1Q96D96 273 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TRIM9Q9C026 710 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TBC1D13Q9NVG8 400 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TBX20Q9UMR3 447 aa14.36□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ABLIM1O14639 778 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MYL1P05976 194 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 SLFN14P0C7P3 912 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MCF2P10911 925 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 IBSPP21815 317 aaPredicted RBP14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PLCB3Q01970 1234 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ALCAMQ13740 583 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TMEM132AQ24JP5 1023 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 DYMQ7RTS9 669 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ZNF720Q7Z2F6 126 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MAP4K3Q8IVH8 894 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 COLGALT1Q8NBJ5 622 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GDPD5Q8WTR4 605 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MRPL38Q96DV4 380 aaKnown RBP14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 C7orf25Q9BPX7 421 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 STRA6Q9BX79 667 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 NXF3Q9H4D5 531 aaKnown RBP14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PLAGL2Q9UPG8 496 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 LZTS1Q9Y250 596 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TRANK1O15050 2925 aa14.35□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ARL5CA6NH57 179 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms