RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ARHGEF19Q8IW93 802 aa21.7■■□□□ 1.06
RTN1-202ENST00000342503 TCP11Q8WWU5 503 aa21.7■■□□□ 1.06
RTN1-202ENST00000342503 POP1Q99575 1024 aaKnown RBP21.7■■□□□ 1.06
RTN1-202ENST00000342503 SUGCTQ9HAC7 445 aa21.7■■□□□ 1.06
RTN1-202ENST00000342503 LUC7LQ9NQ29 371 aaKnown RBP21.7■■□□□ 1.06
RTN1-202ENST00000342503 TRPC6Q9Y210 931 aa21.7■■□□□ 1.06
RTN1-202ENST00000342503 IGKV6-21A0A0C4DH24 114 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 EXTL3O43909 919 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 TADA3O75528 432 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 MOCS3O95396 460 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 EDN1P05305 212 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 RFX1P22670 979 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 MAPK4P31152 587 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 AMPD2Q01433 879 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 MAP2K1Q02750 393 aaPredicted RBP21.69■■□□□ 1.06
RTN1-202ENST00000342503 ARHGAP44Q17R89 818 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 CHADLQ6NUI6 762 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 RASAL3Q86YV0 1011 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 EXOC8Q8IYI6 725 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 TRAPPC12Q8WVT3 735 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 TOPORSQ9NS56 1045 aaPredicted RBP21.69■■□□□ 1.06
RTN1-202ENST00000342503 ZNF236Q9UL36 1845 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 ENC1O14682 589 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 GAS2O43903 313 aaKnown RBP21.69■■□□□ 1.06
RTN1-202ENST00000342503 HBP1O60381 514 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 EVI5O60447 810 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 ATP1A1P05023 1023 aaKnown RBP21.69■■□□□ 1.06
RTN1-202ENST00000342503 ANXA13P27216 316 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 ADCYAP1R1P41586 468 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 ELF2Q15723 593 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 ERCC6LQ2NKX8 1250 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 KRT39Q6A163 491 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 LRRC71Q8N4P6 559 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 MAML3Q96JK9 1138 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 ZBTB45Q96K62 511 aaPredicted RBP21.69■■□□□ 1.06
RTN1-202ENST00000342503 TARS2Q9BW92 718 aaKnown RBP21.69■■□□□ 1.06
RTN1-202ENST00000342503 HAPLN2Q9GZV7 340 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 TMEM8AQ9HCN3 771 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 UBE2TQ9NPD8 197 aaPredicted RBP21.69■■□□□ 1.06
RTN1-202ENST00000342503 CPA4Q9UI42 421 aa21.69■■□□□ 1.06
RTN1-202ENST00000342503 ZNF233A6NK53 670 aa21.68■■□□□ 1.06
RTN1-202ENST00000342503 TACC1O75410 805 aa21.68■■□□□ 1.06
RTN1-202ENST00000342503 ENPEPQ07075 957 aa21.68■■□□□ 1.06
RTN1-202ENST00000342503 LAMTOR4Q0VGL1 99 aa21.68■■□□□ 1.06
RTN1-202ENST00000342503 PSPC1Q8WXF1 523 aaKnown RBP21.68■■□□□ 1.06
RTN1-202ENST00000342503 KIAA1586Q9HCI6 787 aa21.68■■□□□ 1.06
RTN1-202ENST00000342503 SALL4Q9UJQ4 1053 aa21.68■■□□□ 1.06
RTN1-202ENST00000342503 AGO2Q9UKV8 859 aaKnown RBP21.68■■□□□ 1.06
RTN1-202ENST00000342503 CAPN6Q9Y6Q1 641 aa21.68■■□□□ 1.06
RTN1-202ENST00000342503 MYH10P35580 1976 aa21.68■■□□□ 1.06
RTN1-202ENST00000342503 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.67■■□□□ 1.06
RTN1-202ENST00000342503 EFCAB8A8MWE9 144 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 KIAA0391O15091 583 aaKnown RBP21.67■■□□□ 1.06
RTN1-202ENST00000342503 GTF2H1P32780 548 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 ZNF157P51786 506 aaPredicted RBP21.67■■□□□ 1.06
RTN1-202ENST00000342503 SLFN12LQ6IEE8 588 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 TRAPPC11Q7Z392 1133 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 USP37Q86T82 979 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 SEMA4DQ92854 862 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 PACSIN1Q9BY11 444 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 RNPEPQ9H4A4 650 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 ERAP1Q9NZ08 941 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 HDAC6Q9UBN7 1215 aa21.67■■□□□ 1.06
RTN1-202ENST00000342503 SLC15A5A6NIM6 579 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 IGF2BP3O00425 579 aaKnown RBP eCLIP21.66■■□□□ 1.06
RTN1-202ENST00000342503 LGALS2P05162 132 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 DLATP10515 647 aaKnown RBP21.66■■□□□ 1.06
RTN1-202ENST00000342503 NLRP11P59045 1033 aaKnown RBP21.66■■□□□ 1.06
RTN1-202ENST00000342503 MXD4Q14582 209 aaPredicted RBP21.66■■□□□ 1.06
RTN1-202ENST00000342503 C10orf76Q5T2E6 689 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 PAPD7Q5XG87 772 aaKnown RBP21.66■■□□□ 1.06
RTN1-202ENST00000342503 VPS36Q86VN1 386 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 TRIM58Q8NG06 486 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 PPTC7Q8NI37 304 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 NPLOC4Q8TAT6 608 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 AFG1LQ8WV93 481 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 EMID1Q96A84 441 aaPredicted RBP21.66■■□□□ 1.06
RTN1-202ENST00000342503 JPH2Q9BR39 696 aaPredicted RBP21.66■■□□□ 1.06
RTN1-202ENST00000342503 SUCLA2Q9P2R7 463 aaPredicted RBP21.66■■□□□ 1.06
RTN1-202ENST00000342503 NENFQ9UMX5 172 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 COQ4Q9Y3A0 265 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 EVPLQ92817 2033 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 ADGRA2Q96PE1 1338 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 FOXN3O00409 490 aaPredicted RBP21.66■■□□□ 1.06
RTN1-202ENST00000342503 SRGAP2CP0DJJ0 459 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 MATR3P43243 847 aaKnown RBP eCLIP21.66■■□□□ 1.06
RTN1-202ENST00000342503 EFNA5P52803 228 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 NAB2Q15742 525 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 CDCA2Q69YH5 1023 aaPredicted RBP21.66■■□□□ 1.06
RTN1-202ENST00000342503 FMNL3Q8IVF7 1028 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 VTI1AQ96AJ9 217 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 TINF2Q9BSI4 451 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 CCDC113Q9H0I3 377 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 NAGPAQ9UK23 515 aa21.66■■□□□ 1.06
RTN1-202ENST00000342503 ANO9A1A5B4 782 aa21.65■■□□□ 1.06
RTN1-202ENST00000342503 DDX3XO00571 662 aaKnown RBP eCLIP21.65■■□□□ 1.06
RTN1-202ENST00000342503 TFRCP02786 760 aaKnown RBP21.65■■□□□ 1.06
RTN1-202ENST00000342503 ACOT2P49753 483 aa21.65■■□□□ 1.06
RTN1-202ENST00000342503 BMS1Q14692 1282 aaKnown RBP21.65■■□□□ 1.06
RTN1-202ENST00000342503 PSMD6Q15008 389 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms