RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 SNX9Q9Y5X1 595 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 TADA2AO75478 443 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 PSMC1P62191 440 aaKnown RBP16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 GPC5P78333 572 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 SLC7A5Q01650 507 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 RPS6KA2Q15349 733 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 TSNAXIP1Q2TAA8 658 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 EFCAB13Q8IY85 973 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 SPATC1LQ9H0A9 340 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 ANKEF1Q9NU02 776 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 BAIAP2L1Q9UHR4 511 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 DIS3Q9Y2L1 958 aaKnown RBP16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 ADGRG1Q9Y653 693 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 TACC3Q9Y6A5 838 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 VEPH1Q14D04 833 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 RDM1Q8NG50 284 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 GANCQ8TET4 914 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 TNIP3Q96KP6 325 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 FAN1Q9Y2M0 1017 aa16.08■□□□□ 0.16
PCDHB13-201ENST00000341948 ALDH1A1P00352 501 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 NLRP11P59045 1033 aaKnown RBP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 GFPT1Q06210 699 aaPredicted RBP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 LRRC31Q6UY01 552 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 FBXO16Q8IX29 292 aaPredicted RBP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 ASNSD1Q9NWL6 643 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 MANSC4A6NHS7 340 aaPredicted RBP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 NFIBO00712 420 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 CUL1Q13616 776 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 PSMD6Q15008 389 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 SEC23AQ15436 765 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 EMBQ6PCB8 327 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 GLB1LQ6UWU2 654 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 LMNTD2Q8IXW0 634 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 PRMT7Q9NVM4 692 aaPredicted RBP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 RBP5P82980 135 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 STK4Q13043 487 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 CASP8Q14790 479 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 BZW1Q7L1Q6 419 aaKnown RBP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 CFAP57Q96MR6 1250 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 VCX3BQ9H321 246 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 AK9Q5TCS8 1911 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 SLC26A4O43511 780 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 TRIP13Q15645 432 aaPredicted RBP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 ZC2HC1CQ53FD0 456 aaPredicted RBP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 TTC19Q6DKK2 380 aaPredicted RBP16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 CATSPER3Q86XQ3 398 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 CDCA5Q96FF9 252 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 LMCD1Q9NZU5 365 aa16.07■□□□□ 0.16
PCDHB13-201ENST00000341948 SYNGAP1Q96PV0 1343 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 NOL3O60936 208 aaKnown RBP16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 FKBP1AP62942 108 aaKnown RBP16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 RNF219Q5W0B1 726 aaPredicted RBP16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 RNF10Q8N5U6 811 aaKnown RBP16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 ABCB6Q9NP58 842 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 ZRANB2O95218 330 aaKnown RBP eCLIP16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 ITGA4P13612 1032 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 TMEM132DQ14C87 1099 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 NAA25Q14CX7 972 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 ATF7IP2Q5U623 682 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 FKBP1CQ5VVH2 108 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 DAGLBQ8NCG7 672 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 EDEM3Q9BZQ6 932 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 STK38LQ9Y2H1 464 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 C3P01024 1663 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 SLC37A4O43826 429 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 MSH2P43246 934 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 GLE1Q53GS7 698 aaKnown RBP16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 ALS2CLQ60I27 953 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 BCAP29Q9UHQ4 241 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 FZD1Q9UP38 647 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 SUN1O94901 812 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 MYBP10242 640 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 DSG3P32926 999 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 RECQLP46063 649 aaPredicted RBP16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 FBXO38Q6PIJ6 1188 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 KSR1Q8IVT5 923 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 ZFPM1Q8IX07 1006 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 UNC45AQ9H3U1 944 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 GPRC5DQ9NZD1 345 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 CAPN7Q9Y6W3 813 aa16.06■□□□□ 0.16
PCDHB13-201ENST00000341948 SNRNP35Q16560 246 aaKnown RBP16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 PCSK1NQ9UHG2 260 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 NXNQ6DKJ4 435 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 CALR3Q96L12 384 aaKnown RBP16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 C17orf102A2RUQ5 167 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 RHOBTB3O94955 611 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 ARP10275 920 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 CCT5P48643 541 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 PPP2R3CQ969Q6 453 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 UBR1Q8IWV7 1749 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 A0A1B0GUA9 196 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 GSTA1P08263 222 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 GSTA2P09210 222 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 EIF3BP55884 814 aaKnown RBP16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 TMED2Q15363 201 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 ADSSL1Q8N142 457 aa16.05■□□□□ 0.16
PCDHB13-201ENST00000341948 GDAP1Q8TB36 358 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms