RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 ADH1AP07327 375 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 WEE2P0C1S8 567 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 XRCC6P12956 609 aaKnown RBP eCLIP14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 OR1G1P47890 313 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 SPIRE1Q08AE8 756 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 NR5A1Q13285 461 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 UBXN11Q5T124 520 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 GPR149Q86SP6 731 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 BCL7CQ8WUZ0 217 aaPredicted RBP14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 COLEC11Q9BWP8 271 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 CSRNP2Q9H175 543 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 MFSD1Q9H3U5 465 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 TTC12Q9H892 705 aaPredicted RBP14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 CDH22Q9UJ99 828 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 GIT1Q9Y2X7 761 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 IPPQ9Y573 584 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 ARL5CA6NH57 179 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 ZBTB39O15060 712 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 NEMFO60524 1076 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 CTDNEP1O95476 244 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 CNPP09543 421 aaKnown RBP14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 TXKP42681 527 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 CLCN4P51793 760 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 EARS2Q5JPH6 523 aaKnown RBP14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 CYP26C1Q6V0L0 522 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 C15orf39Q6ZRI6 1047 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 CCDC149Q6ZUS6 474 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 IFNLR1Q8IU57 520 aaPredicted RBP14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 SMG8Q8ND04 991 aaKnown RBP14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 ATOH1Q92858 354 aaPredicted RBP14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 HSD17B14Q9BPX1 270 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 NFKBIZQ9BYH8 718 aa14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 MTCL1Q9Y4B5 1905 aaKnown RBP14.51□□□□□ -0.09
NECTIN1-203ENST00000341398 C2CD2LO14523 706 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 TSPAN1O60635 241 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 LILRB3O75022 631 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 BRD1O95696 1058 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 AFF1P51825 1210 aaKnown RBP14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 VCPP55072 806 aaKnown RBP14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 TCF15Q12870 199 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 SAFBQ15424 915 aaKnown RBP eCLIP14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 KANK3Q6NY19 840 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 COLGALT2Q8IYK4 626 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 NECAB1Q8N987 351 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 GTF3C6Q969F1 213 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 CPB2Q96IY4 423 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 RPS6KC1Q96S38 1066 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 GAD1Q99259 594 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 HERC2P3Q9BVR0 1158 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 VN1R3Q9BXE9 311 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 XPNPEP1Q9NQW7 623 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 PRG3Q9Y2Y8 225 aaPredicted RBP14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 CACNA1AO00555 2505 aa14.5□□□□□ -0.09
NECTIN1-203ENST00000341398 BTBD18B2RXH4 712 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 INPPL1O15357 1258 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 ASGR2P07307 311 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 FDPSP14324 419 aaKnown RBP14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 ARL2P36404 184 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 MLH1P40692 756 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 GLUD2P49448 558 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 ME3Q16798 604 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 SLC27A1Q6PCB7 646 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 DIS3L2Q8IYB7 885 aaKnown RBP14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 STAMQ92783 540 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 TNFRSF25Q93038 417 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 APOL6Q9BWW8 343 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 EIF2AQ9BY44 585 aaKnown RBP14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 DAXXQ9UER7 740 aaPredicted RBP14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 USP34Q70CQ2 3546 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 C2orf16Q68DN1 1984 aa14.49□□□□□ -0.09
NECTIN1-203ENST00000341398 FAM205CA6NFA0 338 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 B4GALT3O60512 393 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 GLUD1P00367 558 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 C1RP00736 705 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 ARF4P18085 180 aaPredicted RBP14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 RARRES1P49788 294 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 SCNN1GP51170 649 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 NEK4P51957 841 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 MBTD1Q05BQ5 628 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 CAPSQ13938 189 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 ZBTB8OSQ8IWT0 167 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 MCPH1Q8NEM0 835 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 CMASQ8NFW8 434 aaPredicted RBP14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 PIGOQ8TEQ8 1089 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 HDAC7Q8WUI4 952 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 MAN1C1Q9NR34 630 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 PARP2Q9UGN5 583 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 DENND4AQ7Z401 1863 aa14.48□□□□□ -0.09
NECTIN1-203ENST00000341398 CCDC195A0A1B0GUA6 201 aa14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 LRRIQ4A6NIV6 560 aa14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 GALR2O43603 387 aaPredicted RBP14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 ST18O60284 1047 aa14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 DTNBO60941 627 aa14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 PDGFBP01127 241 aaPredicted RBP14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 ATP2B1P20020 1258 aa14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 GLRA2P23416 452 aa14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 CLCN5P51795 746 aa14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 CREMQ03060 361 aa14.47□□□□□ -0.09
NECTIN1-203ENST00000341398 DSC1Q08554 894 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms