RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 KCNQ2O43526 872 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 KRT1P04264 644 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 TARSP26639 723 aaKnown RBP13.31□□□□□ -0.28
RIOK3-201ENST00000339486 SLC17A8Q8NDX2 589 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 ZBTB10Q96DT7 871 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 SH2D3AQ9BRG2 576 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 CDC42EP4Q9H3Q1 356 aaKnown RBP13.31□□□□□ -0.28
RIOK3-201ENST00000339486 PRM3Q9NNZ6 103 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 TXNDC16Q9P2K2 825 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 USH1CQ9Y6N9 552 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 MRC1P22897 1456 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 RPA1P27694 616 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 PSMC6P62333 389 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 KCNJ2P63252 427 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 CAV1Q03135 178 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 PYROXD1Q8WU10 500 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 TTC17Q96AE7 1141 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 C8orf37Q96NL8 207 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 TRIM55Q9BYV6 548 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 TRABDQ9H4I3 376 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 PCDHB4Q9Y5E5 795 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 NKRFO15226 690 aaKnown RBP eCLIP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 LCA5LO95447 670 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 ITIH2P19823 946 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 RPL21P46778 160 aaKnown RBP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 ITGA8P53708 1063 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 AADACL2Q6P093 401 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 SLC30A9Q6PML9 568 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 SDCCAG8Q86SQ7 713 aaPredicted RBP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 PASD1Q8IV76 773 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 SUPT20HQ8NEM7 779 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 ATG4AQ8WYN0 398 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 MAML1Q92585 1016 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 MTMR9Q96QG7 549 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 ZSWIM1Q9BR11 485 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 MCM8Q9UJA3 840 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 ATXN2Q99700 1313 aaKnown RBP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 A0A0A6YYK5 440 aaPredicted RBP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 FAM47DPA6NHR8 397 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 PPP1R12AO14974 1030 aaPredicted RBP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 HAUS5O94927 633 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 NPEPPSP55786 919 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 SLC8A3P57103 927 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 KLC1Q07866 573 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 GIT2Q14161 759 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 INTS5Q6P9B9 1019 aaKnown RBP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 CENPUQ71F23 418 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 APBB1IPQ7Z5R6 666 aaPredicted RBP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 PGM2Q96G03 612 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 RBM15Q96T37 977 aaKnown RBP eCLIP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 C11orf70Q9BRQ4 267 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 MRPL11Q9Y3B7 192 aaKnown RBP13.3□□□□□ -0.28
RIOK3-201ENST00000339486 NFAT5O94916 1531 aa13.3□□□□□ -0.28
RIOK3-201ENST00000339486 MYBL1P10243 752 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 BPIFB4P59827 614 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 STAT4Q14765 748 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 ACCSLQ4AC99 568 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 PADI6Q6TGC4 694 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.28
RIOK3-201ENST00000339486 OGFOD1Q8N543 542 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 ATL2Q8NHH9 583 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 MORC4Q8TE76 937 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 DNAJC19Q96DA6 116 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 VCX3BQ9H321 246 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 HAO1Q9UJM8 370 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 DMP1Q13316 513 aaPredicted RBP13.29□□□□□ -0.28
RIOK3-201ENST00000339486 NFIXQ14938 502 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 BTNL9Q6UXG8 535 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 RUSC1Q9BVN2 902 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 TRAIPQ9BWF2 469 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 GANQ9H2C0 597 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 MYH8P13535 1937 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.29□□□□□ -0.28
RIOK3-201ENST00000339486 GOLGA8RI6L899 631 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 LMNAP02545 664 aaKnown RBP13.29□□□□□ -0.28
RIOK3-201ENST00000339486 GPS1Q13098 491 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 NR1H3Q13133 447 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 TMEM119Q4V9L6 283 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 ZBED8Q8IZ13 594 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 SLC35C1Q96A29 364 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 ARHGEF26Q96DR7 871 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 TRIM11Q96F44 468 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 SERPINB12Q96P63 405 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 MRPL47Q9HD33 250 aaKnown RBP13.29□□□□□ -0.28
RIOK3-201ENST00000339486 NPHS2Q9NP85 383 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 GINM1Q9NU53 330 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 ADAM22Q9P0K1 906 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 NID2Q14112 1375 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
RIOK3-201ENST00000339486 RIPK2O43353 540 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 NOL4O94818 638 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 LIG4P49917 911 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 CASP5P51878 434 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 BASP1P80723 227 aaKnown RBP13.29□□□□□ -0.28
RIOK3-201ENST00000339486 TMEM154Q6P9G4 183 aa13.29□□□□□ -0.28
RIOK3-201ENST00000339486 SLC20A1Q8WUM9 679 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms