RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PON1P27169 355 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 STAT3P40763 770 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 SNRPFP62306 86 aaKnown RBP11.7□□□□□ -0.54
RTN3-201ENST00000338850 SETQ01105 290 aaPredicted RBP11.7□□□□□ -0.54
RTN3-201ENST00000338850 KLRC3Q07444 240 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 MTMR3Q13615 1198 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 RPS6KA1Q15418 735 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 PRAMEF19Q5SWL8 479 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 KCTD1Q719H9 257 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 SFR1Q86XK3 245 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 ARFGAP2Q8N6H7 521 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 LRRC45Q96CN5 670 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 EEF2KMTQ96G04 330 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 LRCH3Q96II8 777 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 SPAG5Q96R06 1193 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 MMP19Q99542 508 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 FGFBP2Q9BYJ0 223 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 SENP6Q9GZR1 1112 aaPredicted RBP11.7□□□□□ -0.54
RTN3-201ENST00000338850 SIX2Q9NPC8 291 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
RTN3-201ENST00000338850 USP20Q9Y2K6 914 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 STXBP5LQ9Y2K9 1186 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 ZMYM2Q9UBW7 1377 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 IGLV3-22A0A075B6J6 115 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 PGRMC1O00264 195 aaKnown RBP11.69□□□□□ -0.54
RTN3-201ENST00000338850 PGK2P07205 417 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 H2AFZP0C0S5 128 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 HOXD13P35453 343 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 COPB2P35606 906 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 IRAK1P51617 712 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 GHRHRQ02643 423 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 PTK2Q05397 1052 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 KCTD2Q14681 263 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 ZNF792Q3KQV3 632 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 GJC2Q5T442 439 aaPredicted RBP11.69□□□□□ -0.54
RTN3-201ENST00000338850 CFAP58Q5T655 872 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 ALKBH5Q6P6C2 394 aaKnown RBP11.69□□□□□ -0.54
RTN3-201ENST00000338850 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 POTEGQ6S5H5 508 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 H2AFVQ71UI9 128 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 C12orf56Q8IXR9 622 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 SAMD3Q8N6K7 520 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 FAM133AQ8N9E0 248 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 ARRDC4Q8NCT1 418 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 TPCN2Q8NHX9 752 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 HDAC7Q8WUI4 952 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 SLC5A5Q92911 643 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 HSD17B14Q9BPX1 270 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.69□□□□□ -0.54
RTN3-201ENST00000338850 SYT11Q9BT88 431 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 CAPS2Q9BXY5 557 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 WDR11Q9BZH6 1224 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 DMAC2Q9NW81 257 aa11.69□□□□□ -0.54
RTN3-201ENST00000338850 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.69□□□□□ -0.54
RTN3-201ENST00000338850 COL11A1P12107 1806 aaPredicted RBP11.68□□□□□ -0.54
RTN3-201ENST00000338850 MSH4O15457 936 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 BUB1O43683 1085 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 SSBP05455 408 aaKnown RBP eCLIP11.68□□□□□ -0.54
RTN3-201ENST00000338850 TMEM253P0C7T8 217 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 BMP3P12645 472 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 GUCY2CP25092 1073 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 GBP1P32455 592 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 PSMC2P35998 433 aaKnown RBP11.68□□□□□ -0.54
RTN3-201ENST00000338850 SLC16A2P36021 539 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 STAT1P42224 750 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
RTN3-201ENST00000338850 ENPEPQ07075 957 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 B3GNT9Q6UX72 402 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 NIPA1Q7RTP0 329 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 ZNF571Q7Z3V5 609 aaPredicted RBP11.68□□□□□ -0.54
RTN3-201ENST00000338850 NELFCDQ8IXH7 590 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 PRPF38AQ8NAV1 312 aaKnown RBP11.68□□□□□ -0.54
RTN3-201ENST00000338850 SLC30A5Q8TAD4 765 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 PPM1EQ8WY54 764 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 HES6Q96HZ4 224 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 TEX13BQ9BXU2 312 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 STK33Q9BYT3 514 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 FAM129AQ9BZQ8 928 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 UBE2OQ9C0C9 1292 aaKnown RBP11.68□□□□□ -0.54
RTN3-201ENST00000338850 ADAMTS1Q9UHI8 967 aa11.68□□□□□ -0.54
RTN3-201ENST00000338850 SZT2Q5T011 3432 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 A0A087WUV0 522 aaPredicted RBP11.67□□□□□ -0.54
RTN3-201ENST00000338850 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 FAM86B1E9PN63 330 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 OPLAHO14841 1288 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 ATP2A1O14983 1001 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 NCK2O43639 380 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 PHACTR2O75167 634 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 PSMD10O75832 226 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 PPP1R37O75864 691 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 AKAP3O75969 853 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 GLI1P08151 1106 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 FAM86B2P0C5J1 330 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 CASP5P51878 434 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 RTP1P59025 263 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 BIRC3Q13489 604 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 LRIT3Q3SXY7 679 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 PRR16Q569H4 304 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 AGBL2Q5U5Z8 902 aa11.67□□□□□ -0.54
RTN3-201ENST00000338850 SMYD5Q6GMV2 418 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms