RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 ATF7IP2Q5U623 682 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 GIMAP7Q8NHV1 300 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 SKA2Q8WVK7 121 aaPredicted RBP15.17■□□□□ 0.02
PARVB-201ENST00000338758 PRMT7Q9NVM4 692 aaPredicted RBP15.17■□□□□ 0.02
PARVB-201ENST00000338758 DNAJC17Q9NVM6 304 aaKnown RBP15.17■□□□□ 0.02
PARVB-201ENST00000338758 HEY1Q9Y5J3 304 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 IGSF9BQ9UPX0 1349 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 A0A1B0GTH6 734 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 RGS2P41220 211 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 EPHB4P54760 987 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 ZNF211Q13398 564 aaPredicted RBP15.17■□□□□ 0.02
PARVB-201ENST00000338758 POTEAQ6S8J7 498 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 MOXD1Q6UVY6 613 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 SLC30A10Q6XR72 485 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 C15orf52Q6ZUT6 534 aaKnown RBP15.17■□□□□ 0.02
PARVB-201ENST00000338758 STAP1Q9ULZ2 295 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 RSPH10B2B2RC85 870 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 RNF40O75150 1001 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 RSPH10BP0C881 870 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 SLURP2P0DP57 97 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 ZNF131P52739 623 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 RBP5P82980 135 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 CHP1Q99653 195 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 SEC31AO94979 1220 aaKnown RBP15.17■□□□□ 0.02
PARVB-201ENST00000338758 TFDP2Q14188 446 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 SDCCAG8Q86SQ7 713 aaPredicted RBP15.17■□□□□ 0.02
PARVB-201ENST00000338758 RUSC1Q9BVN2 902 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 IPO11Q9UI26 975 aaKnown RBP15.17■□□□□ 0.02
PARVB-201ENST00000338758 GAKO14976 1311 aa15.17■□□□□ 0.02
PARVB-201ENST00000338758 CXCL11O14625 94 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 UPP2O95045 317 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 ADCY1Q08828 1119 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 TMEM132DQ14C87 1099 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 PDE11AQ9HCR9 933 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 TJP3O95049 919 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 UCHL3P15374 230 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 SLC9A1P19634 815 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 DSG3P32926 999 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 FKBP1AP62942 108 aaKnown RBP15.16■□□□□ 0.02
PARVB-201ENST00000338758 FAM117BQ6P1L5 589 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 KCTD17Q8N5Z5 321 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 PPP4R1Q8TF05 950 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 RBM41Q96IZ5 413 aaKnown RBP15.16■□□□□ 0.02
PARVB-201ENST00000338758 TNIP3Q96KP6 325 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 CYP26B1Q9NR63 512 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 AGPAT5Q9NUQ2 364 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 MAP3K20Q9NYL2 800 aaKnown RBP15.16■□□□□ 0.02
PARVB-201ENST00000338758 APEX2Q9UBZ4 518 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 CYP2W1Q8TAV3 490 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 SIGLEC1Q9BZZ2 1709 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 PPFIA4O75335 1185 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 GMNNO75496 209 aa15.16■□□□□ 0.02
PARVB-201ENST00000338758 P2RX7Q99572 595 aaKnown RBP15.16■□□□□ 0.02
PARVB-201ENST00000338758 EPHB1P54762 984 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 CRY2Q49AN0 593 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 ELMSAN1Q6PJG2 1045 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 PARD6BQ9BYG5 372 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 RRN3P2A6NIE6 340 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 CCDC188H7C350 402 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 FXR1P51114 621 aaKnown RBP eCLIP15.15■□□□□ 0.02
PARVB-201ENST00000338758 CLCN3P51790 818 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 GNGT1P63211 74 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 PLCB4Q15147 1175 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 TRIM72Q6ZMU5 477 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 PDIK1LQ8N165 341 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 RNF10Q8N5U6 811 aaKnown RBP15.15■□□□□ 0.02
PARVB-201ENST00000338758 SMYD2Q9NRG4 433 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 VWA5AO00534 786 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 CPT1AP50416 773 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 ATP11AP98196 1134 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 BZW1Q7L1Q6 419 aaKnown RBP15.15■□□□□ 0.02
PARVB-201ENST00000338758 AGPAT1Q99943 283 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 PACSIN2Q9UNF0 486 aaPredicted RBP15.15■□□□□ 0.02
PARVB-201ENST00000338758 PDHXO00330 501 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 NCK2O43639 380 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 AFG1LQ8WV93 481 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 PXMP2Q9NR77 195 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 GPRC5DQ9NZD1 345 aa15.15■□□□□ 0.02
PARVB-201ENST00000338758 SLCO1A2P46721 670 aa15.14■□□□□ 0.02
PARVB-201ENST00000338758 FMO2Q99518 471 aa15.14■□□□□ 0.02
PARVB-201ENST00000338758 SYNGAP1Q96PV0 1343 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 MOCS2O96007 188 aaPredicted RBP15.14■□□□□ 0.01
PARVB-201ENST00000338758 GARSP41250 739 aaKnown RBP15.14■□□□□ 0.01
PARVB-201ENST00000338758 IFNAR2P48551 515 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 PDLIM2Q96JY6 352 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 STK33Q9BYT3 514 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.14■□□□□ 0.01
PARVB-201ENST00000338758 SNX24Q9Y343 169 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 GOLGA8KD6RF30 607 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 EIF3DO15371 548 aaKnown RBP eCLIP15.14■□□□□ 0.01
PARVB-201ENST00000338758 CREB3O43889 395 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 PDGFRBP09619 1106 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 SEPT6Q14141 434 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 RNF180Q86T96 592 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 CCHCR1Q8TD31 782 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 TRAPPC3O43617 180 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 TROVE2P10155 538 aaKnown RBP eCLIP15.14■□□□□ 0.01
PARVB-201ENST00000338758 CCDC62Q6P9F0 684 aa15.14■□□□□ 0.01
PARVB-201ENST00000338758 RAPH1Q70E73 1250 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms