RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ALDH18A1P54886 795 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 EFHC2Q5JST6 749 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 TM6SF1Q9BZW5 370 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 YIPF3Q9GZM5 350 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 GABBR1Q9UBS5 961 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 EIF2AK4Q9P2K8 1649 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 SDC4P31431 198 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 CUL3Q13618 768 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 LRRC36Q1X8D7 754 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 IL31Q6EBC2 164 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 FAM160B2Q86V87 743 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 ARMC2Q8NEN0 867 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 RERGLQ9H628 205 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 SLC24A3Q9HC58 644 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 MAP3K20Q9NYL2 800 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 H2AFY2Q9P0M6 372 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 KRT7P08729 469 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 MMP10P09238 476 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 PPP1R2P3Q6NXS1 205 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 CTIFO43310 598 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 KDM1AO60341 852 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 DEUP1Q05D60 604 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 LMBRD2Q68DH5 695 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 PID1Q7Z2X4 250 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 TMA16Q96EY4 203 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 PARD6BQ9BYG5 372 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 CYP26B1Q9NR63 512 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 DBNLQ9UJU6 430 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 KRT38O76015 456 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 ADD2P35612 726 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 STAT3P40763 770 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 SLC39A14Q15043 492 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L6PQ6QN14 398 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 MMS22LQ6ZRQ5 1243 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 ZBED8Q8IZ13 594 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 SEPT5Q99719 369 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 DHX36Q9H2U1 1008 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 GIMAP4Q9NUV9 329 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.47□□□□□ -0.41
SHANK2-201ENST00000338508 FAM47DPA6NHR8 397 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 TTLL4Q14679 1199 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 ARHGEF25Q86VW2 580 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 TRIM49BA6NDI0 452 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 ASZ1Q8WWH4 475 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 GGT7Q9UJ14 662 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 CAB39Q9Y376 341 aaPredicted RBP12.46□□□□□ -0.41
SHANK2-201ENST00000338508 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.41
SHANK2-201ENST00000338508 TYK2P29597 1187 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 UBE3CQ15386 1083 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 C6orf10Q5SRN2 563 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 VN1R5Q7Z5H4 357 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 TMEM35BQ8NCS4 154 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.41
SHANK2-201ENST00000338508 PKP3Q9Y446 797 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 IKBKBO14920 756 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 CYP2D6P10635 497 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 PCP11498 1178 aaKnown RBP12.46□□□□□ -0.41
SHANK2-201ENST00000338508 IL17REQ8NFR9 667 aa12.46□□□□□ -0.41
SHANK2-201ENST00000338508 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.46□□□□□ -0.413e-7■□□□□ 9.7
SHANK2-201ENST00000338508 PIN4Q9Y237 131 aaKnown RBP12.46□□□□□ -0.41
SHANK2-201ENST00000338508 FAM32AQ9Y421 112 aaKnown RBP12.46□□□□□ -0.41
SHANK2-201ENST00000338508 CYTH3O43739 400 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 BBOX1O75936 387 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 CRKP46108 304 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 SULT1E1P49888 294 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 SESN2P58004 480 aaPredicted RBP12.46□□□□□ -0.42
SHANK2-201ENST00000338508 NCALDP61601 193 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 ARMC6Q6NXE6 501 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 HOXC10Q9NYD6 342 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 SLC9A2Q9UBY0 812 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 TRPC1P48995 793 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 TWF1Q12792 350 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 OR6J1Q8NGC5 347 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 CYGBQ8WWM9 190 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 TMEM60Q9H2L4 133 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 IL1RL2Q9HB29 575 aa12.46□□□□□ -0.42
SHANK2-201ENST00000338508 MAGOHP61326 146 aaKnown RBP12.45□□□□□ -0.42
SHANK2-201ENST00000338508 RPS6P62753 249 aaKnown RBP12.45□□□□□ -0.42
SHANK2-201ENST00000338508 AP2B1P63010 937 aa12.45□□□□□ -0.42
SHANK2-201ENST00000338508 GPSM2P81274 684 aa12.45□□□□□ -0.42
SHANK2-201ENST00000338508 ALDH6A1Q02252 535 aaKnown RBP12.45□□□□□ -0.42
SHANK2-201ENST00000338508 SFR1Q86XK3 245 aa12.45□□□□□ -0.42
SHANK2-201ENST00000338508 CLMNQ96JQ2 1002 aa12.45□□□□□ -0.42
SHANK2-201ENST00000338508 MAN1C1Q9NR34 630 aa12.45□□□□□ -0.42
SHANK2-201ENST00000338508 TMEM260Q9NX78 707 aa12.45□□□□□ -0.42
SHANK2-201ENST00000338508 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
SHANK2-201ENST00000338508 HDAC4P56524 1084 aa12.45□□□□□ -0.42
SHANK2-201ENST00000338508 ZNF772Q68DY9 489 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms