RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PRKCBP05771 671 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 PLA2G4BP0C869 781 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 UBA7P41226 1012 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 NPTX2P47972 431 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 PLCB3Q01970 1234 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 PKP1Q13835 747 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 KARSQ15046 597 aaKnown RBP16.85■□□□□ 0.29
PRKN-201ENST00000338468 PPP2R5AQ15172 486 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 ARSHQ5FYA8 562 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 SPECC1Q5M775 1068 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 THNSL1Q8IYQ7 743 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 DEPTORQ8TB45 409 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 EPSTI1Q96J88 318 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 CDK5RAP3Q96JB5 506 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 IFT74Q96LB3 600 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 ZNF558Q96NG5 402 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 CLIC6Q96NY7 704 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 MRPL9Q9BYD2 267 aaKnown RBP16.85■□□□□ 0.29
PRKN-201ENST00000338468 NXF3Q9H4D5 531 aaKnown RBP16.85■□□□□ 0.29
PRKN-201ENST00000338468 NRDE2Q9H7Z3 1164 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 RSAD1Q9HA92 442 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 FAM50BQ9Y247 325 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 INPP5FQ9Y2H2 1132 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 MYH15Q9Y2K3 1946 aa16.85■□□□□ 0.29
PRKN-201ENST00000338468 NPHP3-ACAD11A0A0J9YXS1 232 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 SFI1A8K8P3 1242 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 ACKR2O00590 384 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 INPPL1O15357 1258 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 DCXO43602 365 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 NPTXRO95502 500 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 SSBP05455 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
PRKN-201ENST00000338468 PLCG1P19174 1290 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 NASPP49321 788 aaPredicted RBP16.84■□□□□ 0.29
PRKN-201ENST00000338468 PEX3P56589 373 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 BCAR1P56945 870 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 ERVFC1P60507 584 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 UBE3AQ05086 875 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 NCBP1Q09161 790 aaKnown RBP16.84■□□□□ 0.29
PRKN-201ENST00000338468 SLC39A14Q15043 492 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 MAPK6Q16659 721 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 NT5DC1Q5TFE4 455 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 EEF1DP3Q658K8 133 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 SLC27A1Q6PCB7 646 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 TAS1R3Q7RTX0 852 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 ADGRD2Q7Z7M1 963 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 TMEM173Q86WV6 379 aaPredicted RBP16.84■□□□□ 0.29
PRKN-201ENST00000338468 ZNF280BQ86YH2 543 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 SLC39A11Q8N1S5 342 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 CNNM3Q8NE01 707 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 RSPH1Q8WYR4 309 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 CCSER1Q9C0I3 900 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 PDZD7Q9H5P4 517 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 ARHGAP28Q9P2N2 729 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
PRKN-201ENST00000338468 NT5C1B-RDH14C9J2C7 533 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 H3BQ06 376 aaPredicted RBP16.83■□□□□ 0.28
PRKN-201ENST00000338468 FSCN2O14926 492 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 DDHD2O94830 711 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 ITGA4P13612 1032 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 GTF2F1P35269 517 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRKN-201ENST00000338468 MRE11P49959 708 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 EFNA5P52803 228 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 RAD51AP2Q09MP3 1159 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 HYAL1Q12794 435 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 PRPF4BQ13523 1007 aaKnown RBP16.83■□□□□ 0.28
PRKN-201ENST00000338468 FOXD4L5Q5VV16 416 aaPredicted RBP16.83■□□□□ 0.28
PRKN-201ENST00000338468 GSTCDQ8NEC7 633 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 BCL7CQ8WUZ0 217 aaPredicted RBP16.83■□□□□ 0.28
PRKN-201ENST00000338468 FOXD4L4Q8WXT5 416 aaPredicted RBP16.83■□□□□ 0.28
PRKN-201ENST00000338468 RAD54LQ92698 747 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 CALML4Q96GE6 196 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 DRC1Q96MC2 740 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 GAD1Q99259 594 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 TIPINQ9BVW5 301 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 MIOSQ9NXC5 875 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 SPG21Q9NZD8 308 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 LZTS1Q9Y250 596 aa16.83■□□□□ 0.28
PRKN-201ENST00000338468 ARL5CA6NH57 179 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 ZC3H11AO75152 810 aaKnown RBP eCLIP16.82■□□□□ 0.28
PRKN-201ENST00000338468 HSP90AA1P07900 732 aaKnown RBP16.82■□□□□ 0.28
PRKN-201ENST00000338468 GALTP07902 379 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
PRKN-201ENST00000338468 LIG1P18858 919 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
PRKN-201ENST00000338468 MCM6Q14566 821 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 CTC1Q2NKJ3 1217 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 LINC00301Q8NCQ3 95 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 MRPS27Q92552 414 aaKnown RBP16.82■□□□□ 0.28
PRKN-201ENST00000338468 PABPC5Q96DU9 382 aaKnown RBP16.82■□□□□ 0.28
PRKN-201ENST00000338468 ZFP42Q96MM3 310 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 NTPCRQ9BSD7 190 aaKnown RBP16.82■□□□□ 0.28
PRKN-201ENST00000338468 APOL6Q9BWW8 343 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 KCNH6Q9H252 994 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 C17orf75Q9HAS0 396 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 UBN1Q9NPG3 1134 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 TLR9Q9NR96 1032 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 KCND2Q9NZV8 630 aa16.82■□□□□ 0.28
PRKN-201ENST00000338468 CCDC169A6NNP5 214 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 N4BP3O15049 544 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms