RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RBM15Q96T37 977 aaKnown RBP eCLIP14.1□□□□□ -0.15
COL2A1-201ENST00000337299 DUSP9Q99956 384 aaKnown RBP14.1□□□□□ -0.15
COL2A1-201ENST00000337299 RNPEPL1Q9HAU8 725 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 FAM217BQ9NTX9 383 aaPredicted RBP14.1□□□□□ -0.15
COL2A1-201ENST00000337299 PCDHA1Q9Y5I3 950 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 CYP19A1P11511 503 aaPredicted RBP14.1□□□□□ -0.15
COL2A1-201ENST00000337299 ASPHQ12797 758 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 GPS1Q13098 491 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 SCG3Q8WXD2 468 aaKnown RBP14.1□□□□□ -0.15
COL2A1-201ENST00000337299 PCDHA6Q9UN73 950 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 PCDHA8Q9Y5H6 950 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 COPEO14579 308 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 ADCY3O60266 1144 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 GAS7O60861 476 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 PBX1P40424 430 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 STAT3P40763 770 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 LVRNQ6Q4G3 990 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 CRLF3Q8IUI8 442 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 SLC25A41Q8N5S1 370 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 EZH1Q92800 747 aaPredicted RBP14.1□□□□□ -0.15
COL2A1-201ENST00000337299 CFAP36Q96G28 342 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 HEY2Q9UBP5 337 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 BCAP29Q9UHQ4 241 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 NOP14P78316 857 aaKnown RBP14.1□□□□□ -0.15
COL2A1-201ENST00000337299 PDE1BQ01064 536 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 MED15Q96RN5 788 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 CDC42EP4Q9H3Q1 356 aaKnown RBP14.1□□□□□ -0.15
COL2A1-201ENST00000337299 KLHL11Q9NVR0 708 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 CDC42BPGQ6DT37 1551 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 APOEP02649 317 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 GSTA2P09210 222 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 GSTT1P30711 240 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 FNTAP49354 379 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 CTTNQ14247 550 aaKnown RBP14.09□□□□□ -0.15
COL2A1-201ENST00000337299 NBPF20Q3BBV1 942 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 KCTD1Q719H9 257 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 ANO5Q75V66 913 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 TRMT10CQ7L0Y3 403 aaKnown RBP14.09□□□□□ -0.15
COL2A1-201ENST00000337299 ATG4AQ8WYN0 398 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 CLMNQ96JQ2 1002 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 LRCH1Q9Y2L9 728 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 ARHGAP10A1A4S6 786 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 TTLL1O95922 423 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 EEF1B2P24534 225 aaKnown RBP14.09□□□□□ -0.15
COL2A1-201ENST00000337299 NCALDP61601 193 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 CYLC2Q14093 348 aaPredicted RBP14.09□□□□□ -0.15
COL2A1-201ENST00000337299 SEPT12Q8IYM1 358 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 PDZD8Q8NEN9 1154 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 C7orf25Q9BPX7 421 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 CTNNAL1Q9UBT7 734 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 GGA2Q9UJY4 613 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 SUGT1Q9Y2Z0 365 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 OVOS2A0A0G2JMS6 1433 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 SHPRHQ149N8 1683 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 FAM196BA6NMK8 535 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 ZBBXA8MT70 800 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 H7C0C1 242 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 ZBED4O75132 1171 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 ATP5OP48047 213 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 PTDSS1P48651 473 aaKnown RBP14.09□□□□□ -0.15
COL2A1-201ENST00000337299 MXI1P50539 228 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 ITGA8P53708 1063 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 RBBP8NLQ8NC74 664 aaPredicted RBP14.09□□□□□ -0.15
COL2A1-201ENST00000337299 CCT6BQ92526 530 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 MOV10L1Q9BXT6 1211 aaKnown RBP14.09□□□□□ -0.15
COL2A1-201ENST00000337299 ANKFY1Q9P2R3 1169 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 COMMD10Q9Y6G5 202 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 ZNF804BA4D1E1 1349 aa14.09□□□□□ -0.15
COL2A1-201ENST00000337299 LPXNO60711 386 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 COMTP21964 271 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 YY1P25490 414 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 SSTR3P32745 418 aaPredicted RBP14.08□□□□□ -0.15
COL2A1-201ENST00000337299 RPS6KA3P51812 740 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 LMNB2Q03252 620 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 ZBTB17Q13105 803 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 PASD1Q8IV76 773 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 PDIK1LQ8N165 341 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 GALNT4Q8N4A0 578 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 NT5C1BQ96P26 610 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 FERMT1Q9BQL6 677 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 TSSK1BQ9BXA7 367 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 MYLK2Q9H1R3 596 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 C1orf112Q9NSG2 853 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 TSC22D4Q9Y3Q8 395 aa14.08□□□□□ -0.15
COL2A1-201ENST00000337299 PXDNLA1KZ92 1463 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 PEX5P50542 639 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 TRPC3Q13507 836 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 MIS18BP1Q6P0N0 1132 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 AGR3Q8TD06 166 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
COL2A1-201ENST00000337299 FIS1Q9Y3D6 152 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.08□□□□□ -0.16
COL2A1-201ENST00000337299 PI4K2BG5E9Z4 385 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 ZNF263O14978 683 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 PYGLP06737 847 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 SOX5P35711 763 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 PDIA6Q15084 440 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 CNGA3Q16281 694 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 KNOP1Q1ED39 458 aaKnown RBP14.08□□□□□ -0.16
COL2A1-201ENST00000337299 FIGNQ5HY92 759 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms