RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ALG3Q92685 438 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 KRT35Q92764 455 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 BTBD6Q96KE9 485 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 ZDHHC15Q96MV8 337 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 HSD17B14Q9BPX1 270 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 TAOK3Q9H2K8 898 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 HOMER2Q9NSB8 354 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 HGSO14964 777 aaPredicted RBP17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 FGFR4P22455 802 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 CCDC38Q502W7 563 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 CEP55Q53EZ4 464 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 PAIP2Q9BPZ3 127 aaKnown RBP17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 AZI2Q9H6S1 392 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 EHMT1Q9H9B1 1298 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 DNAJC17Q9NVM6 304 aaKnown RBP17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 GTPBP10A4D1E9 387 aaKnown RBP17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 TTC36A6NLP5 189 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 NPR1P16066 1061 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 ANXA13P27216 316 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 MARCKSL1P49006 195 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 MIER3Q7Z3K6 550 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 SLFN11Q7Z7L1 901 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 FUKQ8N0W3 1084 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 TEKT3Q9BXF9 490 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 CARD9Q9H257 536 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 MYH4Q9Y623 1939 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 CCDC169A6NNP5 214 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 H0YGN5 161 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 IPO5O00410 1097 aaKnown RBP17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 EIF3DO15371 548 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 SLC26A4O43511 780 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 RASSF9O75901 435 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 VPS41P49754 854 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 BMT2Q1RMZ1 405 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 DPY19L2P1Q6NXN4 242 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 PADI6Q6TGC4 694 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 TCP11Q8WWU5 503 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 LRRC4CQ9HCJ2 640 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 TUFT1Q9NNX1 390 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 STXBP5LQ9Y2K9 1186 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 NFS1Q9Y697 457 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 MMEP08473 750 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 CLTAP09496 248 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 PECAM1P16284 738 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 NPEPPSP55786 919 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 JAG1P78504 1218 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 ZNF772Q68DY9 489 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 RASGEF1CQ8N431 466 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 KAT5Q92993 513 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 MTUS1Q9ULD2 1270 aa17.75■□□□□ 0.43
CDC42EP4-201ENST00000335793 TRAPPC3O43617 180 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 PTENP60484 403 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 TRAF1Q13077 416 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 CALCOCO2Q13137 446 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 TNIP1Q15025 636 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 AGBL2Q5U5Z8 902 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 CCDC137Q6PK04 289 aaKnown RBP17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 MIGA2Q7L4E1 593 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 OTUD6AQ7L8S5 288 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 RHOT2Q8IXI1 618 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 UNC45AQ9H3U1 944 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 INTS9Q9NV88 658 aaKnown RBP17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 COG5Q9UP83 839 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 ECE2O60344 883 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 COMTP21964 271 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 VAMP7P51809 220 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 GPC5P78333 572 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 PPP2R5EQ16537 467 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 DCAF12L1Q5VU92 463 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 CBWD1Q9BRT8 395 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 SEMA4AQ9H3S1 761 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 FBXO28Q9NVF7 368 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 CHN1P15882 459 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 CIITAP33076 1130 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 EIF3BP55884 814 aaKnown RBP17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 KRT27Q7Z3Y8 459 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 ANKS4BQ8N8V4 417 aa17.74■□□□□ 0.43
CDC42EP4-201ENST00000335793 CYP26A1O43174 497 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 MMP10P09238 476 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 KRT5P13647 590 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 HIBCHQ6NVY1 386 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 GMCL1Q96IK5 515 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 MKNK1Q9BUB5 465 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 WDR11Q9BZH6 1224 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 KCNK9Q9NPC2 374 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 WRAP73Q9P2S5 460 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 ASIC3Q9UHC3 531 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 CD2APQ9Y5K6 639 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 DDX3YO15523 660 aaKnown RBP17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 ADCY1Q08828 1119 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 MAPK7Q13164 816 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 TRIP13Q15645 432 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 ARHGEF19Q8IW93 802 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 EIF1ADQ8N9N8 165 aaKnown RBP17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 ZNF653Q96CK0 615 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 PRMT6Q96LA8 375 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 SLC12A6Q9UHW9 1150 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 DBR1Q9UK59 544 aaKnown RBP17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 COL5A3P25940 1745 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms