RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 TMEM206Q9H813 350 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 TNFSF13BQ9Y275 285 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 PMS1P54277 932 aaKnown RBP19.18■□□□□ 0.66
CHGA-202ENST00000334654 UBXN11Q5T124 520 aa19.18■□□□□ 0.66
CHGA-202ENST00000334654 ATF7IP2Q5U623 682 aa19.18■□□□□ 0.66
CHGA-202ENST00000334654 GBP3Q9H0R5 595 aa19.18■□□□□ 0.66
CHGA-202ENST00000334654 GZF1Q9H116 711 aaPredicted RBP19.18■□□□□ 0.66
CHGA-202ENST00000334654 CHST12Q9NRB3 414 aa19.18■□□□□ 0.66
CHGA-202ENST00000334654 EXOC7Q9UPT5 735 aa19.18■□□□□ 0.66
CHGA-202ENST00000334654 PIN4Q9Y237 131 aaKnown RBP19.18■□□□□ 0.66
CHGA-202ENST00000334654 MICAL3Q7RTP6 2002 aa19.18■□□□□ 0.66
CHGA-202ENST00000334654 PDE4DIPQ5VU43 2346 aa19.17■□□□□ 0.66
CHGA-202ENST00000334654 PDXKO00764 312 aa19.17■□□□□ 0.66
CHGA-202ENST00000334654 TOM1L1O75674 476 aa19.17■□□□□ 0.66
CHGA-202ENST00000334654 EPHB4P54760 987 aa19.17■□□□□ 0.66
CHGA-202ENST00000334654 SEPT8Q92599 483 aa19.17■□□□□ 0.66
CHGA-202ENST00000334654 DHTKD1Q96HY7 919 aaPredicted RBP19.17■□□□□ 0.66
CHGA-202ENST00000334654 IL23AQ9NPF7 189 aa19.17■□□□□ 0.66
CHGA-202ENST00000334654 TRAF3IP3Q9Y228 551 aa19.17■□□□□ 0.66
CHGA-202ENST00000334654 HNRNPDLO14979 420 aaKnown RBP19.16■□□□□ 0.66
CHGA-202ENST00000334654 KIF20AO95235 890 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 LIG4P49917 911 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 STX1AQ16623 288 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 NOTUMQ6P988 496 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 C11orf57Q6ZUT1 292 aaPredicted RBP19.16■□□□□ 0.66
CHGA-202ENST00000334654 SYCP3Q8IZU3 236 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 APBB2Q92870 758 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 BICD1Q96G01 975 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 TRAIPQ9BWF2 469 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 EIF2AQ9BY44 585 aaKnown RBP19.16■□□□□ 0.66
CHGA-202ENST00000334654 AGPAT3Q9NRZ7 376 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 TYW1Q9NV66 732 aaKnown RBP19.16■□□□□ 0.66
CHGA-202ENST00000334654 ANO10Q9NW15 660 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 NR2E3Q9Y5X4 410 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 A0A0B4J269 797 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 N4BP3O15049 544 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 ACRP10323 421 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 CCNE1P24864 410 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 PPP1R2P41236 205 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 FPGSQ05932 587 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 MCL1Q07820 350 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 ANKRD40Q6AI12 368 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 KLHL10Q6JEL2 608 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 CNKSR3Q6P9H4 555 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 MPZL3Q6UWV2 235 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 RPUSD2Q8IZ73 545 aaKnown RBP19.16■□□□□ 0.66
CHGA-202ENST00000334654 TMEM174Q8WUU8 243 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 P2RX5Q93086 422 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 ADAM2Q99965 735 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 CBWD1Q9BRT8 395 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 CDT1Q9H211 546 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 RGS18Q9NS28 235 aa19.16■□□□□ 0.66
CHGA-202ENST00000334654 TTC3P53804 2025 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.15■□□□□ 0.66
CHGA-202ENST00000334654 TRIM49BA6NDI0 452 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 ENPP3O14638 875 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 PSMA7O14818 248 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 CLIC2O15247 247 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 FAM189A1O60320 539 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 CAPN15O75808 1086 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 NCBP1Q09161 790 aaKnown RBP19.15■□□□□ 0.66
CHGA-202ENST00000334654 PPIGQ13427 754 aaKnown RBP eCLIP19.15■□□□□ 0.66
CHGA-202ENST00000334654 STIM1Q13586 685 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 TTI2Q6NXR4 508 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 SLC27A1Q6PCB7 646 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 FAM43BQ6ZT52 329 aaPredicted RBP19.15■□□□□ 0.66
CHGA-202ENST00000334654 C12orf56Q8IXR9 622 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 ZSWIM2Q8NEG5 633 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 NELFBQ8WX92 580 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 CCDC51Q96ER9 411 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 DUSP9Q99956 384 aaKnown RBP19.15■□□□□ 0.66
CHGA-202ENST00000334654 FTHL17Q9BXU8 183 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 DNAJC25Q9H1X3 360 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 TSPYL2Q9H2G4 693 aaPredicted RBP19.15■□□□□ 0.66
CHGA-202ENST00000334654 DMAC2Q9NW81 257 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 CTNND2Q9UQB3 1225 aa19.15■□□□□ 0.66
CHGA-202ENST00000334654 C9IYK1 514 aa19.14■□□□□ 0.65
CHGA-202ENST00000334654 PFKMP08237 780 aa19.14■□□□□ 0.65
CHGA-202ENST00000334654 CCDC192P0DO97 292 aa19.14■□□□□ 0.65
CHGA-202ENST00000334654 ZSCAN20P17040 1043 aaPredicted RBP19.14■□□□□ 0.65
CHGA-202ENST00000334654 GARTP22102 1010 aa19.14■□□□□ 0.65
CHGA-202ENST00000334654 SNRPFP62306 86 aaKnown RBP19.14■□□□□ 0.65
CHGA-202ENST00000334654 FAM189BP81408 668 aa19.14■□□□□ 0.65
CHGA-202ENST00000334654 NFIL3Q16649 462 aa19.14■□□□□ 0.65
CHGA-202ENST00000334654 ZBTB33Q86T24 672 aa19.14■□□□□ 0.65
CHGA-202ENST00000334654 CGNQ9P2M7 1197 aaKnown RBP19.14■□□□□ 0.65
CHGA-202ENST00000334654 CLDN3O15551 220 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 NPTXRO95502 500 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 MCF2P10911 925 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 ERCC5P28715 1186 aaPredicted RBP19.13■□□□□ 0.65
CHGA-202ENST00000334654 STX17P56962 302 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 ZNF445P59923 1031 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 PAK1Q13153 545 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 ZNF568Q3ZCX4 644 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 ANO6Q4KMQ2 910 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 CT47A1Q5JQC4 288 aaPredicted RBP19.13■□□□□ 0.65
CHGA-202ENST00000334654 TMEM240Q5SV17 173 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 TWF2Q6IBS0 349 aaKnown RBP19.13■□□□□ 0.65
CHGA-202ENST00000334654 SLFN12LQ6IEE8 588 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms