RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 IKBKBO14920 756 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ATXN8OSP0DMR3 200 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 HSPA6P17066 643 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ADARP55265 1226 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 MOGSQ13724 837 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 DCAF17Q5H9S7 520 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 CNSTQ6PJW8 725 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 MTMR8Q96EF0 704 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 CCDC134Q9H6E4 229 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 FARSBQ9NSD9 589 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 RNF14Q9UBS8 474 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SAGE2PA6NJ88 616 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 YWHABP31946 246 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 RGS21Q2M5E4 152 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 TRPM8Q7Z2W7 1104 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 IFNEQ86WN2 208 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 CAMKK1Q8N5S9 505 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 BEGAINQ9BUH8 593 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SARS2Q9NP81 518 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 ECHDC1Q9NTX5 307 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 ARHGAP6O43182 974 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 BCAR3O75815 825 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 RPN1P04843 607 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SBK2P0C263 348 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 PPARGP37231 505 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 DLG4P78352 724 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 MRPS27Q92552 414 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 APPBP2Q92624 585 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 BCL2L12Q9HB09 334 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 C9orf78Q9NZ63 289 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 MYH14Q7Z406 1995 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 MPDZO75970 2070 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 POLR3DP05423 398 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 POLR2MP0CAP2 368 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 CCNG2Q16589 344 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 RINT1Q6NUQ1 792 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 TTC30AQ86WT1 665 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SCFD2Q8WU76 684 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 A0A0A6YYH2 397 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 A6NJ64 397 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 CSN2P05814 226 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 OCM2P0CE71 109 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 OCMP0CE72 109 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 MARCKSP29966 332 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 C12orf60Q5U649 245 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 CCDC137Q6PK04 289 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 FBXO30Q8TB52 745 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 ANKRD49Q8WVL7 239 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 ST20-MTHFSA0A0A6YYL1 179 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 DLGAP3O95886 979 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 PRR5LQ6MZQ0 368 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 NELFCDQ8IXH7 590 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SIX6OS1Q8N1H7 587 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SSH3Q8TE77 659 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 TTC17Q96AE7 1141 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 TADA1Q96BN2 335 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 EXOC2Q96KP1 924 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDK19Q9BWU1 502 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 DBNDD1Q9H9R9 158 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SPATA2Q9UM82 520 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 GPATCH8Q9UKJ3 1502 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 TARBP1Q13395 1621 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SEC31AO94979 1220 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 RPLP0P05388 317 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF425Q6IV72 752 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SLC25A24Q6NUK1 477 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 ELMO1Q92556 727 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDC6Q99741 560 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 TIMM29Q9BSF4 260 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 ASIC3Q9UHC3 531 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 C14orf166Q9Y224 244 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 ABCA5Q8WWZ7 1642 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 INO80B-WBP1J3KQ70 363 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SRGAP2CP0DJJ0 459 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 MAGEA4P43358 317 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 TFAMQ00059 246 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 MPP2Q14168 576 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 NAALADL2Q58DX5 795 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 TMEM67Q5HYA8 995 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 ARHGEF16Q5VV41 709 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 MYDGFQ969H8 173 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 AGBL1Q96MI9 1066 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 KDM5BQ9UGL1 1544 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 CTNND1O60716 968 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 PET100P0DJ07 73 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 KCNA3P22001 575 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 MFAP3P55082 362 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 GALNT18Q6P9A2 607 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 SYCE2Q6PIF2 218 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 XKRXQ6PP77 449 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 STAG2Q8N3U4 1231 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 UHMK1Q8TAS1 419 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 FAM45AQ8TCE6 357 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 MAGEE2Q8TD90 523 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 GORASP1Q9BQQ3 440 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 HERC2P3Q9BVR0 1158 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.41□□□□□ -1.381e-6■■■□□ 17.5
CDC42BPA-201ENST00000334218 GGA1Q9UJY5 639 aa6.41□□□□□ -1.38
CDC42BPA-201ENST00000334218 RBM47A0AV96 593 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms