RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 WTIPA6NIX2 430 aaPredicted RBP12□□□□□ -0.49
POLR1B-202ENST00000333990 ZRANB2O95218 330 aaKnown RBP eCLIP12□□□□□ -0.49
POLR1B-202ENST00000333990 AKR1A1P14550 325 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 CAPN2P17655 700 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 ACOT2P49753 483 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 PGM5Q15124 567 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 GRIK5Q16478 980 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 CD302Q8IX05 232 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 RPUSD2Q8IZ73 545 aaKnown RBP12□□□□□ -0.49
POLR1B-202ENST00000333990 CALCOCO1Q9P1Z2 691 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 GPR182O15218 404 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 ECEL1O95672 775 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 DNAJC21Q5F1R6 531 aaKnown RBP12□□□□□ -0.49
POLR1B-202ENST00000333990 FYB2Q5VWT5 728 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 CATSPERGQ6ZRH7 1159 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 RIOX2Q8IUF8 465 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 C11orf70Q9BRQ4 267 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 DPH5Q9H2P9 285 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 FRMD4AQ9P2Q2 1039 aaPredicted RBP12□□□□□ -0.49
POLR1B-202ENST00000333990 TADA2AO75478 443 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 SOX5P35711 763 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 MAP7D1Q3KQU3 841 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 RGMBQ6NW40 437 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 MORC4Q8TE76 937 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 TTC1Q99614 292 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 RANBP17Q9H2T7 1088 aaKnown RBP12□□□□□ -0.49
POLR1B-202ENST00000333990 PYCARDQ9ULZ3 195 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 H3BRB1 525 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 CCDC188H7C350 402 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 EXTL3O43909 919 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 PCSK1P29120 753 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 PNPLA4P41247 253 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 FMO5P49326 533 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 NCOA4Q13772 614 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 APPL2Q8NEU8 664 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 RABGGTAQ92696 567 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 PKNOX2Q96KN3 472 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 TUT1Q9H6E5 874 aaKnown RBP12□□□□□ -0.49
POLR1B-202ENST00000333990 AGO4Q9HCK5 861 aaKnown RBP12□□□□□ -0.49
POLR1B-202ENST00000333990 CDKN2AIPQ9NXV6 580 aaPredicted RBP12□□□□□ -0.49
POLR1B-202ENST00000333990 WDR35Q9P2L0 1181 aa12□□□□□ -0.49
POLR1B-202ENST00000333990 SPDYE16A6NNV3 312 aaPredicted RBP11.99□□□□□ -0.49
POLR1B-202ENST00000333990 DPYSL4O14531 572 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 RGS16O15492 202 aaPredicted RBP11.99□□□□□ -0.49
POLR1B-202ENST00000333990 HPDP32754 393 aaPredicted RBP11.99□□□□□ -0.49
POLR1B-202ENST00000333990 CTNNA1P35221 906 aaKnown RBP11.99□□□□□ -0.49
POLR1B-202ENST00000333990 ALDH5A1P51649 535 aaPredicted RBP11.99□□□□□ -0.49
POLR1B-202ENST00000333990 PTPN21Q16825 1174 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 ARHGEF18Q6ZSZ5 1173 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 CCDC110Q8TBZ0 833 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 TARS2Q9BW92 718 aaKnown RBP11.99□□□□□ -0.49
POLR1B-202ENST00000333990 PIDD1Q9HB75 910 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 ANAPC5Q9UJX4 755 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 SNX9Q9Y5X1 595 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 TTC26A0AVF1 554 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 HOXA2O43364 376 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 TJP3O95049 919 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 CSPG5O95196 566 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 MOCS3O95396 460 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 FTCDO95954 541 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 KRT7P08729 469 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 PSMC1P62191 440 aaKnown RBP11.99□□□□□ -0.49
POLR1B-202ENST00000333990 DEFB115Q30KQ5 88 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 SV2CQ496J9 727 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 DARS2Q6PI48 645 aaKnown RBP11.99□□□□□ -0.49
POLR1B-202ENST00000333990 APEX2Q9UBZ4 518 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 PEAK1Q9H792 1746 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 EBAG9O00559 213 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 ENC1O14682 589 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 MYBP10242 640 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 ADORA2AP29274 412 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 GARSP41250 739 aaKnown RBP11.99□□□□□ -0.49
POLR1B-202ENST00000333990 COG7P83436 770 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 APBA1Q02410 837 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 MUM1L1Q5H9M0 696 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 NDUFAF2Q8N183 169 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 ATP8B4Q8TF62 1192 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■■■■ 27.5
POLR1B-202ENST00000333990 MAD1L1Q9Y6D9 718 aa11.99□□□□□ -0.49
POLR1B-202ENST00000333990 IRF6O14896 467 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 OGTO15294 1046 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 ZNF189O75820 626 aaPredicted RBP11.98□□□□□ -0.49
POLR1B-202ENST00000333990 ZBED1O96006 694 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 PSMC4P43686 418 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 GRB10Q13322 594 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 CDO1Q16878 200 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 ERCC6LQ2NKX8 1250 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 IQSEC1Q6DN90 963 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 TADA2BQ86TJ2 420 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 RYBPQ8N488 228 aaPredicted RBP11.98□□□□□ -0.49
POLR1B-202ENST00000333990 TRPM4Q8TD43 1214 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 STK33Q9BYT3 514 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 TMEM8AQ9HCN3 771 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 A1CFQ9NQ94 594 aaKnown RBP11.98□□□□□ -0.49
POLR1B-202ENST00000333990 TBX20Q9UMR3 447 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 UBQLN1Q9UMX0 589 aaKnown RBP11.98□□□□□ -0.49
POLR1B-202ENST00000333990 ANO9A1A5B4 782 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 PPFIA4O75335 1185 aa11.98□□□□□ -0.49
POLR1B-202ENST00000333990 VIMP08670 466 aaKnown RBP11.98□□□□□ -0.49
POLR1B-202ENST00000333990 PLCB4Q15147 1175 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms