RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SNCAIPQ9Y6H5 919 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 POLR2AP24928 1970 aaKnown RBP18.81■□□□□ 0.6
DDX28-201ENST00000332395 ANKRD62A6NC57 917 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 SUPT20HL2P0C7V6 817 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 TNNC1P63316 161 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 SP2Q02086 613 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 VGLL4Q14135 290 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 STXBP2Q15833 593 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 KRT39Q6A163 491 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.81■□□□□ 0.6
DDX28-201ENST00000332395 SND1Q7KZF4 910 aaKnown RBP eCLIP18.81■□□□□ 0.6
DDX28-201ENST00000332395 CHST13Q8NET6 341 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 POMGNT1Q8WZA1 660 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 FBXL18Q96ME1 805 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 TULP1O00294 542 aaPredicted RBP18.81■□□□□ 0.6
DDX28-201ENST00000332395 BUB1BO60566 1050 aaPredicted RBP18.81■□□□□ 0.6
DDX28-201ENST00000332395 HEXIM1O94992 359 aaKnown RBP18.81■□□□□ 0.6
DDX28-201ENST00000332395 TREML2Q5T2D2 321 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 EMBQ6PCB8 327 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 IFT20Q8IY31 132 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 DNERQ8NFT8 737 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 ARHGEF26Q96DR7 871 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 THAP2Q9H0W7 228 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 GDF3Q9NR23 364 aa18.81■□□□□ 0.6
DDX28-201ENST00000332395 HNRNPDLO14979 420 aaKnown RBP18.8■□□□□ 0.6
DDX28-201ENST00000332395 PHACTR2O75167 634 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 SYF2O95926 243 aaKnown RBP18.8■□□□□ 0.6
DDX28-201ENST00000332395 PPATQ06203 517 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 XKR3Q5GH77 459 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 ANKRD35Q8N283 1001 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 PPM1KQ8N3J5 372 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 SEMA4DQ92854 862 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 EXOC4Q96A65 974 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 HES6Q96HZ4 224 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 IFT74Q96LB3 600 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 MFSD14AQ96MC6 490 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 POP1Q99575 1024 aaKnown RBP18.8■□□□□ 0.6
DDX28-201ENST00000332395 POLR3FQ9H1D9 316 aaPredicted RBP18.8■□□□□ 0.6
DDX28-201ENST00000332395 TMEM8AQ9HCN3 771 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.8■□□□□ 0.6
DDX28-201ENST00000332395 AMFRQ9UKV5 643 aa18.8■□□□□ 0.6
DDX28-201ENST00000332395 DICER1Q9UPY3 1922 aaKnown RBP18.8■□□□□ 0.6
DDX28-201ENST00000332395 FAM170AA1A519 330 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 PGRMC1O00264 195 aaKnown RBP18.79■□□□□ 0.6
DDX28-201ENST00000332395 USP8P40818 1118 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 CNTN2Q02246 1040 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 FSTL1Q12841 308 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 ZSCAN26Q16670 478 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 MTERF2Q49AM1 385 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 BRDTQ58F21 947 aaPredicted RBP18.79■□□□□ 0.6
DDX28-201ENST00000332395 CYFIP1Q7L576 1253 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 TMC2Q8TDI7 906 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 SCFD2Q8WU76 684 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 KREMEN1Q96MU8 473 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.79■□□□□ 0.6
DDX28-201ENST00000332395 COQ4Q9Y3A0 265 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 NOC2LQ9Y3T9 749 aaKnown RBP18.79■□□□□ 0.6
DDX28-201ENST00000332395 PTPRFP10586 1907 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 MYH9P35579 1960 aaKnown RBP18.79■□□□□ 0.6
DDX28-201ENST00000332395 ZSCAN5CA6NGD5 496 aaPredicted RBP18.79■□□□□ 0.6
DDX28-201ENST00000332395 PEX10O60683 326 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 ICAM3P32942 547 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 GUCY2DQ02846 1103 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 CYP24A1Q07973 514 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 DLK2Q6UY11 383 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 LBX2Q6XYB7 198 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 TAS1R3Q7RTX0 852 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 FAM71AQ8IYT1 594 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 RPUSD2Q8IZ73 545 aaKnown RBP18.79■□□□□ 0.6
DDX28-201ENST00000332395 ZNF526Q8TF50 670 aaPredicted RBP18.79■□□□□ 0.6
DDX28-201ENST00000332395 PLEKHA4Q9H4M7 779 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 EPB41L5Q9HCM4 733 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 TOPORSQ9NS56 1045 aaPredicted RBP18.79■□□□□ 0.6
DDX28-201ENST00000332395 ARHGAP28Q9P2N2 729 aa18.79■□□□□ 0.6
DDX28-201ENST00000332395 RAD51CO43502 376 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 GGCXP38435 758 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 GPC3P51654 580 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 USP37Q86T82 979 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 KLHL7Q8IXQ5 586 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 GPD1LQ8N335 351 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 RASGEF1CQ8N431 466 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 EPS8L1Q8TE68 723 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 CAVIN3Q969G5 261 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 BICD1Q96G01 975 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 CALR3Q96L12 384 aaKnown RBP18.78■□□□□ 0.6
DDX28-201ENST00000332395 ESYT3A0FGR9 886 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 H0YCG3 227 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 RNF40O75150 1001 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 SGPL1O95470 568 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 GARTP22102 1010 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 CARSP49589 748 aaKnown RBP18.78■□□□□ 0.6
DDX28-201ENST00000332395 MFAP3P55082 362 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 EMC2Q15006 297 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 SEPT14Q6ZU15 432 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 FBXL13Q8NEE6 735 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 TAS1R2Q8TE23 839 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 SHC3Q92529 594 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 ISCUQ9H1K1 167 aa18.78■□□□□ 0.6
DDX28-201ENST00000332395 ZNF302Q9NR11 478 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms