RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 HOOK1Q9UJC3 728 aaKnown RBP28.5■■■□□ 2.15
SMDT1-201ENST00000331479 PCDHA5Q9Y5H7 936 aa28.5■■■□□ 2.15
SMDT1-201ENST00000331479 PRPF6O94906 941 aaKnown RBP28.49■■■□□ 2.15
SMDT1-201ENST00000331479 STK4Q13043 487 aa28.49■■■□□ 2.15
SMDT1-201ENST00000331479 CAMK4Q16566 473 aa28.49■■■□□ 2.15
SMDT1-201ENST00000331479 FAM117BQ6P1L5 589 aa28.49■■■□□ 2.15
SMDT1-201ENST00000331479 ECHDC2Q86YB7 292 aa28.49■■■□□ 2.15
SMDT1-201ENST00000331479 CCDC51Q96ER9 411 aa28.49■■■□□ 2.15
SMDT1-201ENST00000331479 TNFSF13BQ9Y275 285 aa28.49■■■□□ 2.15
SMDT1-201ENST00000331479 PCDHB13Q9Y5F0 798 aa28.49■■■□□ 2.15
SMDT1-201ENST00000331479 RHOBTB3O94955 611 aa28.48■■■□□ 2.15
SMDT1-201ENST00000331479 ATF7P17544 494 aaPredicted RBP28.48■■■□□ 2.15
SMDT1-201ENST00000331479 L1TD1Q5T7N2 865 aaKnown RBP28.48■■■□□ 2.15
SMDT1-201ENST00000331479 SLC27A1Q6PCB7 646 aa28.48■■■□□ 2.15
SMDT1-201ENST00000331479 EPM2AIP1Q7L775 607 aaPredicted RBP28.48■■■□□ 2.15
SMDT1-201ENST00000331479 KIAA0895Q8NCT3 520 aa28.48■■■□□ 2.15
SMDT1-201ENST00000331479 SPATA20Q8TB22 786 aa28.48■■■□□ 2.15
SMDT1-201ENST00000331479 PHOSPHO2Q8TCD6 241 aa28.48■■■□□ 2.15
SMDT1-201ENST00000331479 ZBTB45Q96K62 511 aaPredicted RBP28.48■■■□□ 2.15
SMDT1-201ENST00000331479 PTPRHQ9HD43 1115 aa28.48■■■□□ 2.15
SMDT1-201ENST00000331479 PCDHB2Q9Y5E7 798 aa28.48■■■□□ 2.15
SMDT1-201ENST00000331479 A0A1W2PPC1 479 aa28.47■■■□□ 2.15
SMDT1-201ENST00000331479 N4BP3O15049 544 aa28.47■■■□□ 2.15
SMDT1-201ENST00000331479 NPTXRO95502 500 aa28.47■■■□□ 2.15
SMDT1-201ENST00000331479 ABCD1P33897 745 aa28.47■■■□□ 2.15
SMDT1-201ENST00000331479 KCNB1Q14721 858 aa28.47■■■□□ 2.15
SMDT1-201ENST00000331479 HERC6Q8IVU3 1022 aa28.47■■■□□ 2.15
SMDT1-201ENST00000331479 HVCN1Q96D96 273 aa28.47■■■□□ 2.15
SMDT1-201ENST00000331479 BICD1Q96G01 975 aa28.47■■■□□ 2.15
SMDT1-201ENST00000331479 ABLIM1O14639 778 aa28.46■■■□□ 2.15
SMDT1-201ENST00000331479 PROZP22891 400 aa28.46■■■□□ 2.15
SMDT1-201ENST00000331479 HOXD13P35453 343 aa28.46■■■□□ 2.15
SMDT1-201ENST00000331479 ALCAMQ13740 583 aa28.46■■■□□ 2.15
SMDT1-201ENST00000331479 SLC39A4Q6P5W5 647 aa28.46■■■□□ 2.15
SMDT1-201ENST00000331479 ZPBP2Q6X784 338 aa28.46■■■□□ 2.15
SMDT1-201ENST00000331479 ZNF598Q86UK7 904 aaKnown RBP28.46■■■□□ 2.15
SMDT1-201ENST00000331479 SMG8Q8ND04 991 aaKnown RBP28.46■■■□□ 2.15
SMDT1-201ENST00000331479 SCFD1Q8WVM8 642 aa28.46■■■□□ 2.15
SMDT1-201ENST00000331479 PIGRP01833 764 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 RABGGTBP53611 331 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 PSMD2Q13200 908 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 NPAS4Q8IUM7 802 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 RNF169Q8NCN4 708 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 SMARCE1Q969G3 411 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 CCDC47Q96A33 483 aaKnown RBP28.45■■■□□ 2.15
SMDT1-201ENST00000331479 ACCSQ96QU6 501 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 CLSTN2Q9H4D0 955 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 TMEM161AQ9NX61 479 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 HES2Q9Y543 173 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 IPPQ9Y573 584 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 PCDHB7Q9Y5E2 793 aa28.45■■■□□ 2.15
SMDT1-201ENST00000331479 MEIS3P2A8K0S8 358 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 TISP43B9A030 160 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 ANKRD63C9JTQ0 380 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 HNRNPDLO14979 420 aaKnown RBP28.45■■■□□ 2.14
SMDT1-201ENST00000331479 EIF3DO15371 548 aaKnown RBP eCLIP28.45■■■□□ 2.14
SMDT1-201ENST00000331479 ZNF623O75123 536 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 SMC2O95347 1197 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 GJB5O95377 273 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 LIG4P49917 911 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 ZNF507Q8TCN5 953 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 LPPQ93052 612 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 GSDMAQ96QA5 445 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 HAPLN2Q9GZV7 340 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 ELAC1Q9H777 363 aaKnown RBP28.45■■■□□ 2.14
SMDT1-201ENST00000331479 LRFN2Q9ULH4 789 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 GDAQ9Y2T3 454 aa28.45■■■□□ 2.14
SMDT1-201ENST00000331479 TOM1L1O75674 476 aa28.44■■■□□ 2.14
SMDT1-201ENST00000331479 RAB27AP51159 221 aa28.44■■■□□ 2.14
SMDT1-201ENST00000331479 ZNF568Q3ZCX4 644 aa28.44■■■□□ 2.14
SMDT1-201ENST00000331479 STXBP4Q6ZWJ1 553 aa28.44■■■□□ 2.14
SMDT1-201ENST00000331479 MRPL10Q7Z7H8 261 aaKnown RBP28.44■■■□□ 2.14
SMDT1-201ENST00000331479 ZBTB33Q86T24 672 aa28.44■■■□□ 2.14
SMDT1-201ENST00000331479 ADPGKQ9BRR6 497 aa28.44■■■□□ 2.14
SMDT1-201ENST00000331479 TRIM6Q9C030 488 aaPredicted RBP28.44■■■□□ 2.14
SMDT1-201ENST00000331479 CDT1Q9H211 546 aa28.44■■■□□ 2.14
SMDT1-201ENST00000331479 NXF3Q9H4D5 531 aaKnown RBP28.44■■■□□ 2.14
SMDT1-201ENST00000331479 ANKFY1Q9P2R3 1169 aa28.44■■■□□ 2.14
SMDT1-201ENST00000331479 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.43■■■□□ 2.14
SMDT1-201ENST00000331479 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.43■■■□□ 2.14
SMDT1-201ENST00000331479 STAG3L1P0CL83 205 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 FGFR1P11362 822 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 SKIP12755 728 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 GATMP50440 423 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 MPZL3Q6UWV2 235 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 TCHPQ9BT92 498 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 RNF39Q9H2S5 420 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 RNF19AQ9NV58 838 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 ZMYM2Q9UBW7 1377 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 TRIOBPQ9H2D6 2365 aa28.43■■■□□ 2.14
SMDT1-201ENST00000331479 EOMESO95936 686 aa28.42■■■□□ 2.14
SMDT1-201ENST00000331479 NELFCDQ8IXH7 590 aa28.42■■■□□ 2.14
SMDT1-201ENST00000331479 ZBED2Q9BTP6 218 aa28.42■■■□□ 2.14
SMDT1-201ENST00000331479 RMND1Q9NWS8 449 aa28.42■■■□□ 2.14
SMDT1-201ENST00000331479 MAN1B1Q9UKM7 699 aa28.42■■■□□ 2.14
SMDT1-201ENST00000331479 GBF1Q92538 1859 aa28.42■■■□□ 2.14
SMDT1-201ENST00000331479 DGKIO75912 1065 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 MBD3O95983 291 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 MYOGP15173 224 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 PBX2P40425 430 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms