RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RIOX1Q9H6W3 641 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 TACC3Q9Y6A5 838 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 TCRBV5S4A2TA0A5A2 114 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 CYFIP1Q7L576 1253 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 TLK1Q9UKI8 766 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 PPP1R9AQ9ULJ8 1098 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 H3BRJ5 948 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 ENC1O14682 589 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
COL4A5-201ENST00000328300 RALAP11233 206 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 PRKCEQ02156 737 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 SNX17Q15036 470 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 EFHC2Q5JST6 749 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 AGPAT1Q99943 283 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 APEX2Q9UBZ4 518 aa12.18□□□□□ -0.46
COL4A5-201ENST00000328300 SMAPO00193 183 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 EXTL3O43909 919 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 GTF2H1P32780 548 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 VEPH1Q14D04 833 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 ANKRD40Q6AI12 368 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 EFHBQ8N7U6 833 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 MAF1Q9H063 256 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 SUN1O94901 812 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 CYP11B2P19099 503 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 SYT2Q8N9I0 419 aaPredicted RBP12.17□□□□□ -0.46
COL4A5-201ENST00000328300 PP2D1A8MPX8 630 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 MAPTP10636 758 aaKnown RBP12.17□□□□□ -0.46
COL4A5-201ENST00000328300 ACADSBP45954 432 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 PCNX4Q63HM2 1172 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 VPS39Q96JC1 886 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 APOEP02649 317 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 CYP2C19P33261 490 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 PLTPP55058 493 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 BASP1P80723 227 aaKnown RBP12.17□□□□□ -0.46
COL4A5-201ENST00000328300 DHX34Q14147 1143 aaKnown RBP12.17□□□□□ -0.46
COL4A5-201ENST00000328300 ZSCAN26Q16670 478 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 KLHL38Q2WGJ6 581 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 TRAPPC11Q7Z392 1133 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 GPC2Q8N158 579 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 PALMO75781 387 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 FGGP02679 453 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 RARBP10826 455 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 DHX9Q08211 1270 aaKnown RBP12.17□□□□□ -0.46
COL4A5-201ENST00000328300 MIPOL1Q8TD10 442 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 TMEM8AQ9HCN3 771 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 KCNH7Q9NS40 1196 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 PTPN22Q9Y2R2 807 aa12.17□□□□□ -0.46
COL4A5-201ENST00000328300 PSMD3O43242 534 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 CYP27A1Q02318 531 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 NAA35Q5VZE5 725 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 PPP2R3CQ969Q6 453 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 ATG4CQ96DT6 458 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 NUDCD1Q96RS6 583 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 INTS9Q9NV88 658 aaKnown RBP12.16□□□□□ -0.46
COL4A5-201ENST00000328300 INTUQ9ULD6 942 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 ADGRG1Q9Y653 693 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 VGLL3A8MV65 326 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 KRT37O76014 449 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 CTDNEP1O95476 244 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 MT-ND3P03897 115 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 SERPINB6P35237 376 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 SV2CQ496J9 727 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■□□□ 12.9
COL4A5-201ENST00000328300 NUP85Q9BW27 656 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 RABEP2Q9H5N1 569 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
COL4A5-201ENST00000328300 A8MXQ7 604 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 FMO5P49326 533 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 ARPP19P56211 112 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 PSMC1P62191 440 aaKnown RBP12.16□□□□□ -0.46
COL4A5-201ENST00000328300 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
COL4A5-201ENST00000328300 HPCAL4Q9UM19 191 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 ZC3H11AO75152 810 aaKnown RBP eCLIP12.16□□□□□ -0.469e-6■■□□□ 11.4
COL4A5-201ENST00000328300 KRT3P12035 628 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 PAPOLAP51003 745 aaKnown RBP12.16□□□□□ -0.46
COL4A5-201ENST00000328300 TMEM132DQ14C87 1099 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 EXOC4Q96A65 974 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 NGRNQ9NPE2 291 aaKnown RBP12.16□□□□□ -0.46
COL4A5-201ENST00000328300 TMEM51Q9NW97 253 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 HUNKP57058 714 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 KLC3Q6P597 504 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 ADAT2Q7Z6V5 191 aaKnown RBP12.16□□□□□ -0.46
COL4A5-201ENST00000328300 PLEKHH3Q7Z736 793 aa12.16□□□□□ -0.46
COL4A5-201ENST00000328300 FAM217BQ9NTX9 383 aaPredicted RBP12.16□□□□□ -0.46
COL4A5-201ENST00000328300 TTC26A0AVF1 554 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 PRMT6Q96LA8 375 aaPredicted RBP12.15□□□□□ -0.46
COL4A5-201ENST00000328300 MED1Q15648 1581 aaPredicted RBP12.15□□□□□ -0.46
COL4A5-201ENST00000328300 RASGRF2O14827 1237 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 MAP2K2P36507 400 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 KIAA1755Q5JYT7 1200 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 DCP1BQ8IZD4 617 aaKnown RBP12.15□□□□□ -0.46
COL4A5-201ENST00000328300 SCG3Q8WXD2 468 aaKnown RBP12.15□□□□□ -0.46
COL4A5-201ENST00000328300 MED15Q96RN5 788 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 PPCSQ9HAB8 311 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 GAKO14976 1311 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 GSTA1P08263 222 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 GSTA2P09210 222 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 CDK17Q00537 523 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms