RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 DAB2IPQ5VWQ8 1189 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 TBC1D1Q86TI0 1168 aaPredicted RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 KCNH7Q9NS40 1196 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 SEL1LQ9UBV2 794 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 INTUQ9ULD6 942 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 TRPC6Q9Y210 931 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 PASKQ96RG2 1323 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 IGLV3-22A0A075B6J6 115 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 GTPBP10A4D1E9 387 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 BTNL10A8MVZ5 291 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 FOXO6A8MYZ6 492 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 TRAPPC3O43617 180 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 ECEL1O95672 775 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 MAP2K2P36507 400 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 ADCY8P40145 1251 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 UBAP2Q5T6F2 1119 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 CYP4F22Q6NT55 531 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 MKNK1Q9BUB5 465 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 TMEM39BQ9GZU3 492 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 PABPC3Q9H361 631 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 RAVER2Q9HCJ3 691 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 ZMYM2Q9UBW7 1377 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 NFIBO00712 420 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 HNRNPDLO14979 420 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 DDX3YO15523 660 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 PHF2O75151 1096 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 APBA3O96018 575 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 MAPK4P31152 587 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 NF2P35240 595 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 BMT2Q1RMZ1 405 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 DACT2Q5SW24 774 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 AGBL2Q5U5Z8 902 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 KAZNQ674X7 775 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 RNF207Q6ZRF8 634 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 CCDC91Q7Z6B0 441 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 COL23A1Q86Y22 540 aaPredicted RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 PLVAPQ9BX97 442 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 QTRT2Q9H974 415 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 LAMB2P55268 1798 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 CES2O00748 559 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 TNNI1P19237 187 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 CIITAP33076 1130 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 PPP2R5AQ15172 486 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 PPP2R5EQ16537 467 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 FMNL3Q8IVF7 1028 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 LRRC34Q8IZ02 419 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 MBOAT7Q96N66 472 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 ZSWIM1Q9BR11 485 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 ZNF341Q9BYN7 854 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 STK38LQ9Y2H1 464 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 ZHX2Q9Y6X8 837 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 MYH4Q9Y623 1939 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 H0YGN5 161 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 THAP12O43422 761 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 RPSAP08865 295 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 CHRNA3P32297 505 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 SMTNP53814 917 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 NOP9Q86U38 636 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 LARGE2Q8N3Y3 721 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 PRELID2Q8N945 189 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 IL31RAQ8NI17 732 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 NT5C1BQ96P26 610 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 TMEM206Q9H813 350 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 SLC12A6Q9UHW9 1150 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 STXBP5LQ9Y2K9 1186 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 NFS1Q9Y697 457 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 MIF4GDA9UHW6 222 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 MFAP3P55082 362 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 RWDD2BP57060 319 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 PLCB3Q01970 1234 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 DGKZQ13574 1117 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 FRMPD4Q14CM0 1322 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 LLGL2Q6P1M3 1020 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 ZNF365Q70YC5 407 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 SLFN11Q7Z7L1 901 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 RASGEF1CQ8N431 466 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 DDX23Q9BUQ8 820 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 NSRP1Q9H0G5 558 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 KLHL11Q9NVR0 708 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 ODF2LQ9ULJ1 636 aa13.84□□□□□ -0.19
HMGCS1-201ENST00000325110 FAM187AA6NFU0 413 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 ANXA13P27216 316 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 MTMR1Q13613 665 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 BYSLQ13895 437 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 RASA3Q14644 834 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 NUGGCQ68CJ6 796 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 GMCL1P1Q8NEA9 526 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 CPA5Q8WXQ8 436 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 RNF25Q96BH1 459 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 VCPKMTQ9H867 229 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 CNOT10Q9H9A5 744 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 DENND3A2RUS2 1198 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 KIAA0391O15091 583 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 KRT17Q04695 432 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 SNCBQ16143 134 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms