RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 REREQ9P2R6 1566 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 CPP00450 1065 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 IRAK1P51617 712 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 KYNUQ16719 465 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 TSNAXIP1Q2TAA8 658 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 KLHDC7AQ5VTJ3 777 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 DPY19L2Q6NUT2 758 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 C4orf50Q6ZRC1 276 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 CCDC125Q86Z20 511 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 PDCD7Q8N8D1 485 aaKnown RBP17.6■□□□□ 0.41
CLIP4-201ENST00000320081 CDHR1Q96JP9 859 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 TBC1D22BQ9NU19 505 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 ODF2LQ9ULJ1 636 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 SPATA31A5Q5VU36 1347 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 SPATA31A7Q8IWB4 1347 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 EPHB6O15197 1021 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 PPP1R37O75864 691 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 ZBED1O96006 694 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 RPS6P62753 249 aaKnown RBP17.6■□□□□ 0.41
CLIP4-201ENST00000320081 KRT17Q04695 432 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 STXBP2Q15833 593 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 SNRNP35Q16560 246 aaKnown RBP17.6■□□□□ 0.41
CLIP4-201ENST00000320081 SHROOM1Q2M3G4 852 aaPredicted RBP17.6■□□□□ 0.41
CLIP4-201ENST00000320081 SUPT20HL1Q3ZLR7 823 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 GLE1Q53GS7 698 aaKnown RBP17.6■□□□□ 0.41
CLIP4-201ENST00000320081 PCGF5Q86SE9 256 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 RTKN2Q8IZC4 609 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 AFG3L2Q9Y4W6 797 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 SSU72P8A0A1W2PR75 194 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 M0QZ92 97 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 WEE2P0C1S8 567 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 RINT1Q6NUQ1 792 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 CBWD2Q8IUF1 395 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 SCFD1Q8WVM8 642 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 FAM84AQ96KN4 292 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 SLC13A1Q9BZW2 595 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 ANKZF1Q9H8Y5 726 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 ACP6Q9NPH0 428 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 FEM1BQ9UK73 627 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
CLIP4-201ENST00000320081 MAGEA9P43362 315 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 STRIP1Q5VSL9 837 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 MMS22LQ6ZRQ5 1243 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 C4orf33Q8N1A6 199 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 CCDC33Q8N5R6 958 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 PPM1NQ8N819 430 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 MCPH1Q8NEM0 835 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 ATG4CQ96DT6 458 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 DUSP9Q99956 384 aaKnown RBP17.59■□□□□ 0.41
CLIP4-201ENST00000320081 ZNF446Q9NWS9 450 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 GCKP35557 465 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
CLIP4-201ENST00000320081 PSMC1P62191 440 aaKnown RBP17.59■□□□□ 0.41
CLIP4-201ENST00000320081 C6orf118Q5T5N4 469 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 TMEM35BQ8NCS4 154 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 TAAR1Q96RJ0 339 aa17.59■□□□□ 0.41
CLIP4-201ENST00000320081 MIF4GDA9UHW6 222 aaKnown RBP17.58■□□□□ 0.41
CLIP4-201ENST00000320081 TISP43B9A030 160 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 ITGA4P13612 1032 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 SERPINB6P35237 376 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 RGS7P49802 495 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 PPP4CP60510 307 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 CATSPER4Q7RTX7 472 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 SRLQ86TD4 932 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 CCT8L2Q96SF2 557 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 TARS2Q9BW92 718 aaKnown RBP17.58■□□□□ 0.41
CLIP4-201ENST00000320081 IKZF4Q9H2S9 585 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 MYO3BQ8WXR4 1341 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 NR3C2P08235 984 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 RASSF2P50749 326 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 KRT76Q01546 638 aa17.58■□□□□ 0.41
CLIP4-201ENST00000320081 ZKSCAN4Q969J2 545 aaPredicted RBP17.58■□□□□ 0.41
CLIP4-201ENST00000320081 GLI1P08151 1106 aa17.58■□□□□ 0.4
CLIP4-201ENST00000320081 TPD52P55327 224 aaPredicted RBP17.58■□□□□ 0.4
CLIP4-201ENST00000320081 SNX16P57768 344 aa17.58■□□□□ 0.4
CLIP4-201ENST00000320081 PDIA2Q13087 525 aaKnown RBP17.58■□□□□ 0.4
CLIP4-201ENST00000320081 TFDP1Q14186 410 aa17.58■□□□□ 0.4
CLIP4-201ENST00000320081 TOPORSQ9NS56 1045 aaPredicted RBP17.58■□□□□ 0.4
CLIP4-201ENST00000320081 ZNF70Q9UC06 446 aaPredicted RBP17.58■□□□□ 0.4
CLIP4-201ENST00000320081 E2F8A0AVK6 867 aa17.58■□□□□ 0.4
CLIP4-201ENST00000320081 HSPA6P17066 643 aa17.58■□□□□ 0.4
CLIP4-201ENST00000320081 C1orf228Q6PIY5 440 aa17.58■□□□□ 0.4
CLIP4-201ENST00000320081 CRAMP1Q96RY5 1269 aa17.58■□□□□ 0.4
CLIP4-201ENST00000320081 ZNF302Q9NR11 478 aa17.58■□□□□ 0.4
CLIP4-201ENST00000320081 RIMS1Q86UR5 1692 aaKnown RBP17.57■□□□□ 0.4
CLIP4-201ENST00000320081 PODXLO00592 558 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 TRAPPC11Q7Z392 1133 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 DHX38Q92620 1227 aaKnown RBP17.57■□□□□ 0.4
CLIP4-201ENST00000320081 FAF2Q96CS3 445 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 CFAP57Q96MR6 1250 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 NYAP2Q9P242 653 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLIP4-201ENST00000320081 NAB2Q15742 525 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 IZUMO3Q5VZ72 239 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 FOXR1Q6PIV2 292 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 MICALL2Q8IY33 904 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 BBOF1Q8ND07 529 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 PPP4R1Q8TF05 950 aa17.57■□□□□ 0.4
CLIP4-201ENST00000320081 PSPC1Q8WXF1 523 aaKnown RBP17.57■□□□□ 0.4
CLIP4-201ENST00000320081 LRRC4Q9HBW1 653 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms