RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 TRIM10Q9UDY6 481 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 NAGPAQ9UK23 515 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 TMEM59LQ9UK28 342 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 JRKLQ9Y4A0 524 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 A0A087X0T9 212 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 CTAGE9A4FU28 777 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 DDX3XO00571 662 aaKnown RBP eCLIP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 ZRANB2O95218 330 aaKnown RBP eCLIP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 GGPS1O95749 300 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 FAM228BP0C875 321 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 MAPK4P31152 587 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 EFNA5P52803 228 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 PRKG1Q13976 671 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 KCTD2Q14681 263 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 HSDL1Q3SXM5 330 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 FAM102BQ5T8I3 360 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 MEI1Q5TIA1 1274 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 SLFN12LQ6IEE8 588 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 C17orf99Q6UX52 265 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 RABGGTAQ92696 567 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 MAML3Q96JK9 1138 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 RPGRIP1Q96KN7 1286 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 PARK7Q99497 189 aaKnown RBP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 SMARCAD1Q9H4L7 1026 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 SEPT9Q9UHD8 586 aaPredicted RBP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 GNEQ9Y223 722 aaKnown RBP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 SCN10AQ9Y5Y9 1956 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 HAS3O00219 553 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 ASAP2O43150 1006 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 STAT1P42224 750 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 ZNF132P52740 706 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 MXD4Q14582 209 aaPredicted RBP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 TSR1Q2NL82 804 aaKnown RBP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 ZACNQ401N2 412 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 GPR142Q7Z601 462 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 CEP112Q8N8E3 955 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 KREMEN1Q96MU8 473 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 JPH2Q9BR39 696 aaPredicted RBP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 ZNF446Q9NWS9 450 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 TTC7AQ9ULT0 858 aaPredicted RBP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 SAMM50Q9Y512 469 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 PATJQ8NI35 1801 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 HBP1O60381 514 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 LDHAP00338 332 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 SLC10A3P09131 477 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 CHRNB2P17787 502 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 TNFRSF8P28908 595 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 AP3M2P53677 418 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 GFPT1Q06210 699 aaPredicted RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 PLS1Q14651 629 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 CREG2Q8IUH2 290 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 ARHGEF19Q8IW93 802 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 SEMA4DQ92854 862 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 ACO2Q99798 780 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 IFIH1Q9BYX4 1025 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 POLD4Q9HCU8 107 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 TSKSQ9UJT2 592 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 SNX12Q9UMY4 172 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 CCL15-CCL14A0A0B4J2E2 113 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 CLSTN1O94985 981 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 VNN1O95497 513 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 STAU1O95793 577 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 ACO1P21399 889 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 ADORA2AP29274 412 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 TTLL4Q14679 1199 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 CCL15Q16663 113 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 DNTTIP2Q5QJE6 756 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 MARCH8Q5T0T0 291 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 KRT39Q6A163 491 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 WDR93Q6P2C0 686 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 CBWD2Q8IUF1 395 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 GPR161Q8N6U8 529 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 C2orf40Q9H1Z8 148 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 LZTFL1Q9NQ48 299 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 RNF14Q9UBS8 474 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 CPSF3Q9UKF6 684 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 CAPN6Q9Y6Q1 641 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 MEFVO15553 781 aaPredicted RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 ATP8B1O43520 1251 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 PGK2P07205 417 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 TMEM253P0C7T8 217 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 CYP2C8P10632 490 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 WNT7BP56706 349 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 MBTD1Q05BQ5 628 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 PRPF4BQ13523 1007 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 DUSP28Q4G0W2 176 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 ZNF569Q5MCW4 686 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 IQSEC1Q6DN90 963 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 SEPT14Q6ZU15 432 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 RASGEF1CQ8N431 466 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 SECISBP2LQ93073 1101 aaKnown RBP7.79□□□□□ -1.16
NPHP1-201ENST00000316534 IFT74Q96LB3 600 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 ANKZF1Q9H8Y5 726 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 EFCC1Q9HA90 598 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 DNAJC12Q9UKB3 198 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 DUSP10Q9Y6W6 482 aa7.79□□□□□ -1.16
NPHP1-201ENST00000316534 TARSL2A2RTX5 802 aaKnown RBP7.78□□□□□ -1.16
NPHP1-201ENST00000316534 EVI5O60447 810 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 EXOC3O60645 756 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms