RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 ITGA2BP08514 1039 aa13.12□□□□□ -0.31
EBF1-201ENST00000313708 LGSNQ5TDP6 509 aa13.12□□□□□ -0.31
EBF1-201ENST00000313708 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
EBF1-201ENST00000313708 CIDEBQ9UHD4 219 aa13.12□□□□□ -0.31
EBF1-201ENST00000313708 RIPK2O43353 540 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 KCNJ1P48048 391 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 MAPK7Q13164 816 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 STAT4Q14765 748 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 TRIM16LQ309B1 348 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 NCCRP1Q6ZVX7 275 aaPredicted RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 SPATA7Q9P0W8 599 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 ESRRBO95718 433 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 ATF7P17544 494 aaPredicted RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 PRR16Q569H4 304 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 AK8Q96MA6 479 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 RANBP17Q9H2T7 1088 aaKnown RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 PCDHA4Q9UN74 947 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 KNDC1Q76NI1 1749 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 PALLDQ8WX93 1383 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 ZC3H4Q9UPT8 1303 aaKnown RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 A6NJR5 290 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 PRKAB2O43741 272 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 SKIV2L2P42285 1042 aaKnown RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 TUBP50607 506 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 LRRC6Q86X45 466 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 CCDC89Q8N998 374 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 PAIP1Q9H074 479 aaKnown RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 NEUROG2Q9H2A3 272 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 LRMDAQ9H2I8 198 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 DENND2DQ9H6A0 471 aaPredicted RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 GPR108Q9NPR9 543 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 DTNAQ9Y4J8 743 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 NOP56O00567 594 aaKnown RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 CDC42EP4Q9H3Q1 356 aaKnown RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 SMG5Q9UPR3 1016 aaKnown RBP13.11□□□□□ -0.31
EBF1-201ENST00000313708 ATP11BQ9Y2G3 1177 aa13.11□□□□□ -0.31
EBF1-201ENST00000313708 PXDNLA1KZ92 1463 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 SMIM31A0A1B0GVY4 71 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 MIF4GDA9UHW6 222 aaKnown RBP13.1□□□□□ -0.31
EBF1-201ENST00000313708 ZSCAN9O15535 394 aaPredicted RBP13.1□□□□□ -0.31
EBF1-201ENST00000313708 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
EBF1-201ENST00000313708 ATICP31939 592 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 KCNH2Q12809 1159 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 NUDCD3Q8IVD9 361 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 ENAHQ8N8S7 591 aaPredicted RBP13.1□□□□□ -0.31
EBF1-201ENST00000313708 EIF1ADQ8N9N8 165 aaKnown RBP13.1□□□□□ -0.31
EBF1-201ENST00000313708 SLC35G2Q8TBE7 412 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 CKAP2Q8WWK9 683 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 FAM89AQ96GI7 184 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 TOM1L1O75674 476 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 PTK2Q05397 1052 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 SGMS1Q86VZ5 419 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 CRLF3Q8IUI8 442 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 GIPC3Q8TF64 312 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 ECSITQ9BQ95 431 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 IGKV5-2P06315 115 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 RARGP13631 454 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 ITGA6P23229 1130 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 EEF1B2P24534 225 aaKnown RBP13.1□□□□□ -0.31
EBF1-201ENST00000313708 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 STKLD1Q8NE28 680 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 ZNF333Q96JL9 665 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 PARVBQ9HBI1 364 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 SELENONQ9NZV5 590 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 CNOT7Q9UIV1 285 aaKnown RBP13.1□□□□□ -0.31
EBF1-201ENST00000313708 LRRC42Q9Y546 428 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 CDK7P50613 346 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 UBE3CQ15386 1083 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 TRIM59Q8IWR1 403 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 RFFLQ8WZ73 363 aa13.1□□□□□ -0.31
EBF1-201ENST00000313708 ARAP3Q8WWN8 1544 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 SFI1A8K8P3 1242 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 MAN1A2O60476 641 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 PEX11AO75192 247 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 ACTN1P12814 892 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 OCA2Q04671 838 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 RASGRF1Q13972 1273 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 UNC13DQ70J99 1090 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 ANKRD23Q86SG2 305 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 NEK8Q86SG6 692 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 SPATA5Q8NB90 893 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 DDI1Q8WTU0 396 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 DOLKQ9UPQ8 538 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 MTO1Q9Y2Z2 717 aaKnown RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 LAD1O00515 517 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 PJA2O43164 708 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 ARL1P40616 181 aaPredicted RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 NEK2P51955 445 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 YWHAGP61981 247 aaKnown RBP eCLIP13.09□□□□□ -0.31
EBF1-201ENST00000313708 THOC7Q6I9Y2 204 aaKnown RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 MIGA2Q7L4E1 593 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms