RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 FAM133BQ5BKY9 247 aaKnown RBP10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 SALL4Q9UJQ4 1053 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 CROTQ9UKG9 612 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 PCDHA12Q9UN75 941 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 KIAA1024Q9UPX6 916 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 TMX2Q9Y320 296 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 SH3GLB1Q9Y371 365 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 ZNF536O15090 1300 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 BICDL2A1A5D9 508 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 PLA2G4BP0C869 781 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 RXRBP28702 533 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 HOXA13P31271 388 aaPredicted RBP10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 CCNFP41002 786 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 PRELPP51888 382 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 GUCY2DQ02846 1103 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 TRAPPC11Q7Z392 1133 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 CACNA2D3Q8IZS8 1091 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 MTMR14Q8NCE2 650 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 CAGE1Q8TC20 777 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 PPP1R14BQ96C90 147 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 CSRNP1Q96S65 589 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 VCX3BQ9H321 246 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 VCX3AQ9NNX9 186 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 SEL1LQ9UBV2 794 aa10.24□□□□□ -0.77
RBFOX1-201ENST00000311745 HSF2BPO75031 334 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 EGFRP00533 1210 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 KRT14P02533 472 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 PYGMP11217 842 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 ANO7Q6IWH7 933 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 CCHCR1Q8TD31 782 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 WDR60Q8WVS4 1066 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 ZNF653Q96CK0 615 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 MPHOSPH6Q99547 160 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 LRRC27Q9C0I9 530 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 NHEJ1Q9H9Q4 299 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 DAAM1Q9Y4D1 1078 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 CLRN2A0PK11 232 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 TCP10L2B9ZVM9 353 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 SPTLC1O15269 473 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 PPIP5K2O43314 1243 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 BMP3P12645 472 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 ETS2P15036 469 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 AMPD3Q01432 767 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 LRRC63Q05C16 580 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 USH1GQ495M9 461 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 KRT79Q5XKE5 535 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 CPLX4Q7Z7G2 160 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 ERMNQ8TAM6 284 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 GBP5Q96PP8 586 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 SH3GL1Q99961 368 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 NOC4LQ9BVI4 516 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 AMNQ9BXJ7 453 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 DEFB129Q9H1M3 183 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 CARD9Q9H257 536 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 IKZF4Q9H2S9 585 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 VCXQ9H320 206 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 NDST4Q9H3R1 872 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 ZNF277Q9NRM2 450 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 TMCO1Q9UM00 188 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 PLAGL2Q9UPG8 496 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 TSC22D4Q9Y3Q8 395 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 KIAA1217Q5T5P2 1943 aa10.23□□□□□ -0.77
RBFOX1-201ENST00000311745 TBX3O15119 743 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 USO1O60763 962 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 STK10O94804 968 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 TPPPO94811 219 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 NPTXRO95502 500 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 FAM107AO95990 144 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 KCNA2P16389 499 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 MRPS35P82673 323 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 TMEM266Q2M3C6 531 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 TTMPQ5BVD1 217 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 ATP6V0A1Q93050 837 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 HIC2Q96JB3 615 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 TEPSINQ96N21 525 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 NDEL1Q9GZM8 345 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 TMEM39BQ9GZU3 492 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 SUCLA2Q9P2R7 463 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 ZBTB21Q9ULJ3 1066 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 EFR3BQ9Y2G0 817 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 RSPH10B2B2RC85 870 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 BOLA2-SMG1P6H3BVE0 249 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 ZBTB39O15060 712 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 TBC1D12O60347 775 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 PSMD10O75832 226 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 RSPH10BP0C881 870 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 DPEP1P16444 411 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 ATP2A2P16615 1042 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 HMGB2P26583 209 aaKnown RBP10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 RPA1P27694 616 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 LRP8Q14114 963 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 CRELD2Q6UXH1 353 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 FBXO11Q86XK2 927 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 TRIM59Q8IWR1 403 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 RETREG2Q8NC44 543 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 FAM151AQ8WW52 585 aa10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 L3MBTL3Q96JM7 780 aaPredicted RBP10.22□□□□□ -0.77
RBFOX1-201ENST00000311745 HSD17B14Q9BPX1 270 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms