RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 DENND2CQ68D51 928 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 TTBK2Q6IQ55 1244 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 DNAJC5GQ8N7S2 189 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 FBXO25Q8TCJ0 367 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 NEK9Q8TD19 979 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 ZFATQ9P243 1243 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 USP17L10C9JJH3 530 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 OAS1P00973 400 aaKnown RBP20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 NUDT17P0C025 328 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 H2AFZP0C0S5 128 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 CREB1P16220 341 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 PECAM1P16284 738 aaPredicted RBP20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 RPA1P27694 616 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 SPIRE1Q08AE8 756 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 GNPTABQ3T906 1256 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 MAP1SQ66K74 1059 aaPredicted RBP20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 H2AFVQ71UI9 128 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 NT5DC3Q86UY8 548 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 ETNPPLQ8TBG4 499 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 CCDC17Q96LX7 622 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 TCP11X1B4DZS4 312 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 FERP16591 822 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 SHMT1P34896 483 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 SLMAPQ14BN4 828 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 FITM2Q8N6M3 262 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 DCAF4Q8WV16 495 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 SIX2Q9NPC8 291 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 ARHGEF3Q9NR81 526 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 CNOT7Q9UIV1 285 aaKnown RBP20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 ZMYND8Q9ULU4 1186 aaPredicted RBP20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 DNM3Q9UQ16 869 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 USP15Q9Y4E8 981 aaPredicted RBP20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 ITGBL1O95965 494 aaPredicted RBP20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 RAB27AP51159 221 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 ZNF211Q13398 564 aaPredicted RBP20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 PPP2R5EQ16537 467 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 NBPF20Q3BBV1 942 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 DCAF12L1Q5VU92 463 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 DUPD1Q68J44 220 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 ZDHHC24Q6UX98 284 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 OTUD6AQ7L8S5 288 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 OSGEPQ9NPF4 335 aa20.29■□□□□ 0.84
HERPUD2-201ENST00000311350 RPTORQ8N122 1335 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 PASKQ96RG2 1323 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 SPDYE5A6NIY4 337 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 FGFR4P22455 802 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 RPS12P25398 132 aaKnown RBP20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 CTCFP49711 727 aaPredicted RBP20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 DR1Q01658 176 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 CACNB1Q02641 598 aaPredicted RBP20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 RNASELQ05823 741 aaKnown RBP20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 PODNQ7Z5L7 613 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 NAF1Q96HR8 494 aaKnown RBP20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 FAM20AQ96MK3 541 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 PIDD1Q9HB75 910 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 NCANO14594 1321 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 CCDC169A6NNP5 214 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 MPHOSPH10O00566 681 aaKnown RBP20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 HOXD13P35453 343 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 RWDD2BP57060 319 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 RBBP5Q15291 538 aaKnown RBP20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 AADACL2Q6P093 401 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 MICALL2Q8IY33 904 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 GJA10Q969M2 543 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 MKL1Q969V6 931 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 ERP44Q9BS26 406 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 RAB17Q9H0T7 212 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 CCDC134Q9H6E4 229 aa20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 AJAP1Q9UKB5 411 aaPredicted RBP20.28■□□□□ 0.84
HERPUD2-201ENST00000311350 VIL1P09327 827 aaKnown RBP20.27■□□□□ 0.84
HERPUD2-201ENST00000311350 CATSPER3Q86XQ3 398 aa20.27■□□□□ 0.84
HERPUD2-201ENST00000311350 HES6Q96HZ4 224 aa20.27■□□□□ 0.84
HERPUD2-201ENST00000311350 RMDN2Q96LZ7 410 aa20.27■□□□□ 0.84
HERPUD2-201ENST00000311350 CASP5P51878 434 aa20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 MKRN4PQ13434 485 aaPredicted RBP20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 PLS1Q14651 629 aa20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 CLUL1Q15846 466 aa20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 QRICH1Q2TAL8 776 aa20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 ASRGL1Q7L266 308 aa20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 SFR1Q86XK3 245 aa20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 NSRP1Q9H0G5 558 aaKnown RBP20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 CPSF2Q9P2I0 782 aaKnown RBP20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 PPP1R9AQ9ULJ8 1098 aa20.27■□□□□ 0.83
HERPUD2-201ENST00000311350 POTEFA5A3E0 1075 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 NR3C1P04150 777 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 GAP43P17677 238 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 PDE6CP51160 858 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 ANO7Q6IWH7 933 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 POTEGQ6S5H5 508 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 POTEEQ6S8J3 1075 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 UIMC1Q96RL1 719 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 REEP2Q9BRK0 252 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 DDX4Q9NQI0 724 aaKnown RBP20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 LIN7AO14910 233 aaPredicted RBP20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 EIF3DO15371 548 aaKnown RBP eCLIP20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 FOSP01100 380 aaPredicted RBP20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 HLA-DOAP06340 250 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 PDHA1P08559 390 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 SPATA31C1P0DKV0 1188 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 GNAT1P11488 350 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms