RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 PNMA5Q96PV4 448 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 FGFR1OP2Q9NVK5 253 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 STK24Q9Y6E0 443 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 ANO9A1A5B4 782 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 GLI1P08151 1106 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 PRR5LQ6MZQ0 368 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 TAOK1Q7L7X3 1001 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 USP33Q8TEY7 942 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 ZMYND12Q9H0C1 365 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 MAGEA13PA6NCF6 341 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 RNASELQ05823 741 aaKnown RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 CYLC2Q14093 348 aaPredicted RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 TTBK2Q6IQ55 1244 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 PHLDB2Q86SQ0 1253 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 UCMAQ8WVF2 138 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 CENPOQ9BU64 300 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 UTP11Q9Y3A2 253 aaKnown RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 ZC3H4Q9UPT8 1303 aaKnown RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 TRAF5O00463 557 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 SH3BP5O60239 455 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 STK10O94804 968 aaKnown RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 STAMBPO95630 424 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 S100BP04271 92 aaPredicted RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 ATP6V1C1P21283 382 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 PEX5P50542 639 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 TUBP50607 506 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 GALK1P51570 392 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 BPIFB4P59827 614 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 KRT25Q7Z3Z0 450 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 MMGT1Q8N4V1 131 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 CFAP61Q8NHU2 1237 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 PIGOQ8TEQ8 1089 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 LARP4BQ92615 738 aaKnown RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 NAP1L3Q99457 506 aaPredicted RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 C7orf25Q9BPX7 421 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 TMBIM4Q9HC24 238 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 DNAJC17Q9NVM6 304 aaKnown RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 PDP2Q9P2J9 529 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 MYH10P35580 1976 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 TCP11X1B4DZS4 312 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 PYGMP11217 842 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 TM4SF1P30408 202 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 MIGA2Q7L4E1 593 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 PODNQ7Z5L7 613 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 AP1M1Q9BXS5 423 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 USP15Q9Y4E8 981 aaPredicted RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 SHBGP04278 402 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 TAL1P17542 331 aaPredicted RBP11.19□□□□□ -0.62
MSRB3-201ENST00000308259 HSD17B3P37058 310 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 TGFB2P61812 414 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 RIPK1Q13546 671 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 RASA3Q14644 834 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 HAUS3Q68CZ6 603 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 CATSPER2Q96P56 530 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 PACSIN1Q9BY11 444 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 SIK3Q9Y2K2 1263 aa11.19□□□□□ -0.62
MSRB3-201ENST00000308259 CCDC169A6NNP5 214 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 POLR2FP61218 127 aaKnown RBP11.18□□□□□ -0.62
MSRB3-201ENST00000308259 BTKQ06187 659 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 TBL3Q12788 808 aaKnown RBP11.18□□□□□ -0.62
MSRB3-201ENST00000308259 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 COL23A1Q86Y22 540 aaPredicted RBP11.18□□□□□ -0.62
MSRB3-201ENST00000308259 IQCDQ96DY2 449 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 OLFM3Q96PB7 478 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 TRAPPC9Q96Q05 1148 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 MXD3Q9BW11 206 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 GNA11P29992 359 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 SNAP25P60880 206 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 AMPD3Q01432 767 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 C6orf89Q6UWU4 347 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 TRIM67Q6ZTA4 783 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 PLCB1Q9NQ66 1216 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 ADAM22Q9P0K1 906 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 TDRKHQ9Y2W6 561 aaKnown RBP11.18□□□□□ -0.62
MSRB3-201ENST00000308259 A0A1B0GUL6 1792 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 E9PMD0 336 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 CALB2P22676 271 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 MTTPP55157 894 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 LRRC36Q1X8D7 754 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 EAPPQ56P03 285 aaPredicted RBP11.18□□□□□ -0.62
MSRB3-201ENST00000308259 C6orf183Q5T699 404 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 KCTD1Q719H9 257 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
MSRB3-201ENST00000308259 PLAGL2Q9UPG8 496 aa11.18□□□□□ -0.62
MSRB3-201ENST00000308259 DDHD2O94830 711 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 GYS1P13807 737 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 ZCWPW2Q504Y3 356 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 LACTB2Q53H82 288 aaPredicted RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 HSP90AA5PQ58FG0 334 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 IRGCQ6NXR0 463 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 NCCRP1Q6ZVX7 275 aaPredicted RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 ERGIC2Q96RQ1 377 aa11.17□□□□□ -0.62
MSRB3-201ENST00000308259 LSM14BQ9BX40 385 aaKnown RBP11.17□□□□□ -0.62
MSRB3-201ENST00000308259 AZI2Q9H6S1 392 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms