RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 IMPG1Q17R60 797 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 IZUMO3Q5VZ72 239 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 MMP19Q99542 508 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 ELP3Q9H9T3 547 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 NDFIP2Q9NV92 336 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 BARHL2Q9NY43 387 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 AURKCQ9UQB9 309 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 SF3B3Q15393 1217 aaKnown RBP16.41■□□□□ 0.22
FNDC1-201ENST00000297267 NUDCD3Q8IVD9 361 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 FAM49BQ9NUQ9 324 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 GLI2P10070 1586 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 GCFC2P16383 781 aaKnown RBP16.41■□□□□ 0.22
FNDC1-201ENST00000297267 COPS2P61201 443 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 ROR1Q01973 937 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 FASTKD1Q53R41 847 aaKnown RBP16.41■□□□□ 0.22
FNDC1-201ENST00000297267 MCEEQ96PE7 176 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 KLC2Q9H0B6 622 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 PFDN6O15212 129 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 ZRANB2O95218 330 aaKnown RBP eCLIP16.41■□□□□ 0.22
FNDC1-201ENST00000297267 ATG16L1Q676U5 607 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 PDIK1LQ8N165 341 aa16.41■□□□□ 0.22
FNDC1-201ENST00000297267 NPHP4O75161 1426 aaPredicted RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 P3H1Q32P28 736 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 SLC25A41Q8N5S1 370 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 IL17RAQ96F46 866 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 ZBED2Q9BTP6 218 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 WARS2Q9UGM6 360 aaKnown RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 F5H6K3 240 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 BBOX1O75936 387 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 YWHABP31946 246 aaKnown RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 LIFRP42702 1097 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 KLRC3Q07444 240 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 RASGRP2Q7LDG7 609 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 ATG9AQ7Z3C6 839 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 TMA16Q96EY4 203 aaKnown RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 UNKQ9C0B0 810 aaKnown RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 HSPBP1Q9NZL4 362 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 TRPC5Q9UL62 973 aaPredicted RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 SERPIND1P05546 499 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 CHN1P15882 459 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 SULT1E1P49888 294 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 RPS6P62753 249 aaKnown RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 GRM4Q14833 912 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 EXOC4Q96A65 974 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 MMTAG2Q9BU76 263 aaKnown RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 RNF146Q9NTX7 359 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 GMNCA6NCL1 334 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 ZBTB24O43167 697 aaPredicted RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 CTIFO43310 598 aaKnown RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 HMGCS2P54868 508 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 SPON2Q9BUD6 331 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 ANGPTL2Q9UKU9 493 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 L3MBTL1Q9Y468 752 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 UTYO14607 1347 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 PRPF4O43172 522 aaKnown RBP eCLIP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 PCP11498 1178 aaKnown RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 KCNA4P22459 653 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 FXR1P51114 621 aaKnown RBP eCLIP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 ARL4CP56559 192 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 TMEM179Q6ZVK1 233 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 SPATS2Q86XZ4 545 aaKnown RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 PGBD4Q96DM1 585 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 FAM84BQ96KN1 310 aaPredicted RBP16.4■□□□□ 0.22
FNDC1-201ENST00000297267 LMCD1Q9NZU5 365 aa16.4■□□□□ 0.22
FNDC1-201ENST00000297267 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 IPO5O00410 1097 aaKnown RBP16.39■□□□□ 0.21
FNDC1-201ENST00000297267 KCNJ1P48048 391 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 ARHGDIAP52565 204 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 CDH6P55285 790 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
FNDC1-201ENST00000297267 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 NEO1Q92859 1461 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 STXBP2Q15833 593 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 CNOT10Q9H9A5 744 aaKnown RBP16.39■□□□□ 0.21
FNDC1-201ENST00000297267 KIF17Q9P2E2 1029 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 PNMA2Q9UL42 364 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 APOBEC2Q9Y235 224 aaKnown RBP16.39■□□□□ 0.21
FNDC1-201ENST00000297267 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 AATKQ6ZMQ8 1374 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 YY1P25490 414 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 ETFBP38117 255 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 C16orf87Q6PH81 154 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 LRRC71Q8N4P6 559 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 XXYLT1Q8NBI6 393 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 SLC9A2Q9UBY0 812 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 E5RI56 91 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 CYP19A1P11511 503 aaPredicted RBP16.39■□□□□ 0.21
FNDC1-201ENST00000297267 CUL1Q13616 776 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 KLC3Q6P597 504 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 PPP1R13LQ8WUF5 828 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 LOC102724159A0A0B4J2E5 919 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 A8MXQ7 604 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 GRIK1P39086 918 aa16.39■□□□□ 0.21
FNDC1-201ENST00000297267 PWP2Q15269 919 aaKnown RBP16.39■□□□□ 0.21
FNDC1-201ENST00000297267 GLE1Q53GS7 698 aaKnown RBP16.39■□□□□ 0.21
FNDC1-201ENST00000297267 TADA2BQ86TJ2 420 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms