RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ARHGEF26Q96DR7 871 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 TARS2Q9BW92 718 aaKnown RBP10.05□□□□□ -0.8
PRDM9-201ENST00000296682 MOV10L1Q9BXT6 1211 aaKnown RBP10.05□□□□□ -0.8
PRDM9-201ENST00000296682 ACAD9Q9H845 621 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 NENFQ9UMX5 172 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 TRPC6Q9Y210 931 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 BZW2Q9Y6E2 419 aaKnown RBP10.05□□□□□ -0.8
PRDM9-201ENST00000296682 CCDC66A2RUB6 948 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 INO80B-WBP1J3KQ70 363 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 PSAPP07602 524 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 PRLRP16471 622 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 KRT76Q01546 638 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 WDR44Q5JSH3 913 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 DAB2IPQ5VWQ8 1189 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 LLGL2Q6P1M3 1020 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 GOLGA5Q8TBA6 731 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 CPA5Q8WXQ8 436 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 CLMNQ96JQ2 1002 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 INO80BQ9C086 356 aaPredicted RBP10.04□□□□□ -0.8
PRDM9-201ENST00000296682 AZI2Q9H6S1 392 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 ODF2LQ9ULJ1 636 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 F8VZ95 297 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 PJA2O43164 708 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 RAD51CO43502 376 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 KIF4AO95239 1232 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 FAM153BP0C7A2 387 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 STXBP2Q15833 593 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 FAM153CQ494X1 144 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 CEP85LQ5SZL2 805 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 PCNX4Q63HM2 1172 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 MRRFQ96E11 262 aaKnown RBP10.04□□□□□ -0.8
PRDM9-201ENST00000296682 RPGRIP1Q96KN7 1286 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 TEPSINQ96N21 525 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 NT5C1BQ96P26 610 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 STK33Q9BYT3 514 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 VPS33BQ9H267 617 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 HOXC10Q9NYD6 342 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 SEL1LQ9UBV2 794 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 FAM153AQ9UHL3 310 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 LMNB1P20700 586 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 HNRNPH2P55795 449 aaKnown RBP10.04□□□□□ -0.8
PRDM9-201ENST00000296682 TGFB2P61812 414 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 LY6KQ17RY6 165 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 BMT2Q1RMZ1 405 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 TREML2Q5T2D2 321 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 EPM2AIP1Q7L775 607 aaPredicted RBP10.04□□□□□ -0.8
PRDM9-201ENST00000296682 RNF10Q8N5U6 811 aaKnown RBP10.04□□□□□ -0.8
PRDM9-201ENST00000296682 SLC16A10Q8TF71 515 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 TRAPPC12Q8WVT3 735 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 TRIM51Q9BSJ1 452 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 HEMGNQ9BXL5 484 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 MTFR1LQ9H019 292 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 AIPL1Q9NZN9 384 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 NXF1Q9UBU9 619 aaKnown RBP10.04□□□□□ -0.8
PRDM9-201ENST00000296682 TBX20Q9UMR3 447 aa10.04□□□□□ -0.8
PRDM9-201ENST00000296682 SART1O43290 800 aaKnown RBP10.03□□□□□ -0.8
PRDM9-201ENST00000296682 DAPK3O43293 454 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 ZNF862O60290 1169 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 ADRB2P07550 413 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 GJB1P08034 283 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 CD19P15391 556 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 TMOD1P28289 359 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 TFAMQ00059 246 aaKnown RBP10.03□□□□□ -0.8
PRDM9-201ENST00000296682 GJC2Q5T442 439 aaPredicted RBP10.03□□□□□ -0.8
PRDM9-201ENST00000296682 BSNDQ8WZ55 320 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 RNF19AQ9NV58 838 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 NOC2LQ9Y3T9 749 aaKnown RBP10.03□□□□□ -0.8
PRDM9-201ENST00000296682 BHMG1C9JSJ3 638 aaPredicted RBP10.03□□□□□ -0.8
PRDM9-201ENST00000296682 TTI1O43156 1089 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 MMEP08473 750 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 MUTP22033 750 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 PIK3CAP42336 1068 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 KCNJ1P48048 391 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 PLTPP55058 493 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 ZSCAN26Q16670 478 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 WDR93Q6P2C0 686 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 B3GNT9Q6UX72 402 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 CPNE8Q86YQ8 564 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 CCDC105Q8IYK2 499 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 FAM76AQ8TAV0 307 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 LNX1Q8TBB1 728 aaPredicted RBP10.03□□□□□ -0.8
PRDM9-201ENST00000296682 AGPAT1Q99943 283 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 ATP8A1Q9Y2Q0 1164 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 SNX24Q9Y343 169 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 CD2APQ9Y5K6 639 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 PGRMC1O00264 195 aaKnown RBP10.03□□□□□ -0.8
PRDM9-201ENST00000296682 DHX15O43143 795 aaKnown RBP10.03□□□□□ -0.8
PRDM9-201ENST00000296682 ATP2C2O75185 946 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 GGPS1O95749 300 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 JAK3P52333 1124 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 KAZNQ674X7 775 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 MIS18BP1Q6P0N0 1132 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 MTMR14Q8NCE2 650 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 TPCN2Q8NHX9 752 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 TMEM117Q9H0C3 514 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 ZNF302Q9NR11 478 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 C1orf112Q9NSG2 853 aa10.03□□□□□ -0.8
PRDM9-201ENST00000296682 PCDHB4Q9Y5E5 795 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms