RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 WDR5P61964 334 aaKnown RBP24.78■■□□□ 1.56
LINC01116-201ENST00000295549 FAM189BP81408 668 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 KCNA1Q09470 495 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 KLHL40Q2TBA0 621 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 SLC27A1Q6PCB7 646 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 PDZD7Q9H5P4 517 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 C9IYK1 514 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 HNRNPDLO14979 420 aaKnown RBP24.78■■□□□ 1.56
LINC01116-201ENST00000295549 TOM1L1O75674 476 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 PROZP22891 400 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 TMEM132AQ24JP5 1023 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 C9orf50Q5SZB4 431 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 UBXN11Q5T124 520 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 ZNF658Q5TYW1 1059 aaPredicted RBP24.78■■□□□ 1.56
LINC01116-201ENST00000295549 BICD1Q96G01 975 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 PRO3102Q9H379 93 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 CXXC1Q9P0U4 656 aaPredicted RBP24.78■■□□□ 1.56
LINC01116-201ENST00000295549 MAN1B1Q9UKM7 699 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 ZNF623O75123 536 aa24.77■■□□□ 1.56
LINC01116-201ENST00000295549 HOXD13P35453 343 aa24.77■■□□□ 1.56
LINC01116-201ENST00000295549 RAB27AP51159 221 aa24.77■■□□□ 1.56
LINC01116-201ENST00000295549 SHHQ15465 462 aa24.77■■□□□ 1.56
LINC01116-201ENST00000295549 NFKBIBQ15653 356 aa24.77■■□□□ 1.56
LINC01116-201ENST00000295549 SKOR2Q2VWA4 1001 aaPredicted RBP24.77■■□□□ 1.56
LINC01116-201ENST00000295549 RBM43Q6ZSC3 357 aaKnown RBP24.77■■□□□ 1.56
LINC01116-201ENST00000295549 TRIML1Q8N9V2 468 aa24.77■■□□□ 1.56
LINC01116-201ENST00000295549 ZBBXA8MT70 800 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 ABLIM1O14639 778 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 KIF20AO95235 890 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 SKIP12755 728 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 KCNJ6P48051 423 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 LIG4P49917 911 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 MORC3Q14149 939 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 COBLL1Q53SF7 1204 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 CCDC183Q5T5S1 534 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.76■■□□□ 1.55
LINC01116-201ENST00000295549 APBB1IPQ7Z5R6 666 aaPredicted RBP24.76■■□□□ 1.55
LINC01116-201ENST00000295549 CDR2LQ86X02 465 aaPredicted RBP24.76■■□□□ 1.55
LINC01116-201ENST00000295549 MYOCDQ8IZQ8 938 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 CRIPAKQ8N1N5 446 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 ADPGKQ9BRR6 497 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 FAM105AQ9NUU6 356 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 RNF216Q9NWF9 866 aaPredicted RBP24.76■■□□□ 1.55
LINC01116-201ENST00000295549 GDAQ9Y2T3 454 aa24.76■■□□□ 1.55
LINC01116-201ENST00000295549 AMHP03971 560 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 DCAF4L1Q3SXM0 396 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 EEF1DP3Q658K8 133 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 SLC39A4Q6P5W5 647 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 MPZL3Q6UWV2 235 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 SYCP3Q8IZU3 236 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 GUF1Q8N442 669 aaKnown RBP24.75■■□□□ 1.55
LINC01116-201ENST00000295549 PHOSPHO2Q8TCD6 241 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 RNPC3Q96LT9 517 aaKnown RBP24.75■■□□□ 1.55
LINC01116-201ENST00000295549 EIF2AQ9BY44 585 aaKnown RBP24.75■■□□□ 1.55
LINC01116-201ENST00000295549 ELAC1Q9H777 363 aaKnown RBP24.75■■□□□ 1.55
LINC01116-201ENST00000295549 PCDHB2Q9Y5E7 798 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 STYXL1Q9Y6J8 313 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 SLC4A7Q9Y6M7 1214 aa24.75■■□□□ 1.55
LINC01116-201ENST00000295549 CLDN3O15551 220 aa24.74■■□□□ 1.55
LINC01116-201ENST00000295549 EOMESO95936 686 aa24.74■■□□□ 1.55
LINC01116-201ENST00000295549 MCL1Q07820 350 aa24.74■■□□□ 1.55
LINC01116-201ENST00000295549 KNOP1Q1ED39 458 aaKnown RBP24.74■■□□□ 1.55
LINC01116-201ENST00000295549 CHRDL2Q6WN34 429 aa24.74■■□□□ 1.55
LINC01116-201ENST00000295549 MRPL10Q7Z7H8 261 aaKnown RBP24.74■■□□□ 1.55
LINC01116-201ENST00000295549 ECHDC2Q86YB7 292 aa24.74■■□□□ 1.55
LINC01116-201ENST00000295549 TOP1MTQ969P6 601 aa24.74■■□□□ 1.55
LINC01116-201ENST00000295549 SYAP1Q96A49 352 aaPredicted RBP24.74■■□□□ 1.55
LINC01116-201ENST00000295549 TCHPQ9BT92 498 aa24.74■■□□□ 1.55
LINC01116-201ENST00000295549 GBP3Q9H0R5 595 aa24.74■■□□□ 1.55
LINC01116-201ENST00000295549 TMEM63CQ9P1W3 806 aa24.74■■□□□ 1.55
LINC01116-201ENST00000295549 ANKRD63C9JTQ0 380 aa24.73■■□□□ 1.55
LINC01116-201ENST00000295549 MCF2P10911 925 aa24.73■■□□□ 1.55
LINC01116-201ENST00000295549 BMP6P22004 513 aa24.73■■□□□ 1.55
LINC01116-201ENST00000295549 SNRPFP62306 86 aaKnown RBP24.73■■□□□ 1.55
LINC01116-201ENST00000295549 DEFB103AP81534 67 aa24.73■■□□□ 1.55
LINC01116-201ENST00000295549 ZNF568Q3ZCX4 644 aa24.73■■□□□ 1.55
LINC01116-201ENST00000295549 PRPF38BQ5VTL8 546 aaKnown RBP24.73■■□□□ 1.55
LINC01116-201ENST00000295549 SLFN12LQ6IEE8 588 aa24.73■■□□□ 1.55
LINC01116-201ENST00000295549 ZNF598Q86UK7 904 aaKnown RBP24.73■■□□□ 1.55
LINC01116-201ENST00000295549 NELFCDQ8IXH7 590 aa24.73■■□□□ 1.55
LINC01116-201ENST00000295549 TDHQ8IZJ6 230 aa24.73■■□□□ 1.55
LINC01116-201ENST00000295549 ZBTB45Q96K62 511 aaPredicted RBP24.73■■□□□ 1.55
LINC01116-201ENST00000295549 TRIM6Q9C030 488 aaPredicted RBP24.73■■□□□ 1.55
LINC01116-201ENST00000295549 TMEM161AQ9NX61 479 aa24.73■■□□□ 1.55
LINC01116-201ENST00000295549 ZMYM2Q9UBW7 1377 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 BIN1O00499 593 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 NPTXRO95502 500 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 NOLC1Q14978 699 aaKnown RBP eCLIP24.72■■□□□ 1.55
LINC01116-201ENST00000295549 NPAS4Q8IUM7 802 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 SMYD4Q8IYR2 804 aaPredicted RBP24.72■■□□□ 1.55
LINC01116-201ENST00000295549 SMG8Q8ND04 991 aaKnown RBP24.72■■□□□ 1.55
LINC01116-201ENST00000295549 SLC9A7Q96T83 725 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 CDT1Q9H211 546 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 IKZF4Q9H2S9 585 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 CGNQ9P2M7 1197 aaKnown RBP24.72■■□□□ 1.55
LINC01116-201ENST00000295549 ANKFY1Q9P2R3 1169 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 IPPQ9Y573 584 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 PCDHB7Q9Y5E2 793 aa24.72■■□□□ 1.55
LINC01116-201ENST00000295549 A0A0B4J269 797 aa24.71■■□□□ 1.55
LINC01116-201ENST00000295549 TGFB1I1O43294 461 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms