RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 NAB2Q15742 525 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 C2orf69Q8N8R5 385 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 GOLGA1Q92805 767 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 BICD1Q96G01 975 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 ALS2CR12Q96Q35 445 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 PARK7Q99497 189 aaKnown RBP11.05□□□□□ -0.64
C9orf43-201ENST00000288462 KIAA1586Q9HCI6 787 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 TMEM8AQ9HCN3 771 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 PDGFCQ9NRA1 345 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 NAGPAQ9UK23 515 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 JRKLQ9Y4A0 524 aa11.05□□□□□ -0.64
C9orf43-201ENST00000288462 LRRIQ4A6NIV6 560 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 ENC1O14682 589 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 STRNO43815 780 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 EXTL3O43909 919 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 H2AFXP16104 143 aaPredicted RBP11.04□□□□□ -0.64
C9orf43-201ENST00000288462 CHMP4BP1P59074 171 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 PLCB4Q15147 1175 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 ENOX2Q16206 610 aaKnown RBP11.04□□□□□ -0.64
C9orf43-201ENST00000288462 CDCA2Q69YH5 1023 aaPredicted RBP11.04□□□□□ -0.64
C9orf43-201ENST00000288462 KRT39Q6A163 491 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 TAPT1Q6NXT6 567 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 USP37Q86T82 979 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 VPS36Q86VN1 386 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 ARHGEF19Q8IW93 802 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 EXOC8Q8IYI6 725 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 PDCL2Q8N4E4 241 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 RABGGTAQ92696 567 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 GLG1Q92896 1179 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 COPS5Q92905 334 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 NOX5Q96PH1 765 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.04□□□□□ -0.64
C9orf43-201ENST00000288462 KATNBL1Q9H079 304 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 RRAGCQ9HB90 399 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 HDAC6Q9UBN7 1215 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 SAR1BQ9Y6B6 198 aa11.04□□□□□ -0.64
C9orf43-201ENST00000288462 DDX3XO00571 662 aaKnown RBP eCLIP11.03□□□□□ -0.64
C9orf43-201ENST00000288462 ADCY3O60266 1144 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 TFRCP02786 760 aaKnown RBP11.03□□□□□ -0.64
C9orf43-201ENST00000288462 EDN1P05305 212 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 CCDC172P0C7W6 258 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 MARK3P27448 753 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 GPC3P51654 580 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 CLDN10P78369 228 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
C9orf43-201ENST00000288462 DRP2Q13474 957 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 GRB14Q14449 540 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 HSP90AA2PQ14568 343 aaPredicted RBP11.03□□□□□ -0.64
C9orf43-201ENST00000288462 FAM110CQ1W6H9 321 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 TMEM63BQ5T3F8 832 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 IER5Q5VY09 327 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 FBXO38Q6PIJ6 1188 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 MAMDC4Q6UXC1 1216 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 SLC30A5Q8TAD4 765 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 TCP11Q8WWU5 503 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 PACSIN1Q9BY11 444 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 CCDC113Q9H0I3 377 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 PCDHGC5Q9Y5F6 944 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 K7ERI5 159 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 KLRC1P26715 233 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 MAP2K1Q02750 393 aaPredicted RBP11.03□□□□□ -0.64
C9orf43-201ENST00000288462 PSMD6Q15008 389 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 KIAA0753Q2KHM9 967 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 TEX35Q5T0J7 233 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 SLFN12LQ6IEE8 588 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 C15orf39Q6ZRI6 1047 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 LNX1Q8TBB1 728 aaPredicted RBP11.03□□□□□ -0.64
C9orf43-201ENST00000288462 PSPC1Q8WXF1 523 aaKnown RBP11.03□□□□□ -0.64
C9orf43-201ENST00000288462 SEMA4DQ92854 862 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
C9orf43-201ENST00000288462 CCDC127Q96BQ5 260 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 PTPN18Q99952 460 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 FAM213AQ9BRX8 229 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 HAPLN2Q9GZV7 340 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 TOPORSQ9NS56 1045 aaPredicted RBP11.03□□□□□ -0.64
C9orf43-201ENST00000288462 INTUQ9ULD6 942 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 SNX12Q9UMY4 172 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 IVNS1ABPQ9Y6Y0 642 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 ADGRA2Q96PE1 1338 aa11.03□□□□□ -0.64
C9orf43-201ENST00000288462 ZNF233A6NK53 670 aa11.02□□□□□ -0.64
C9orf43-201ENST00000288462 LRRN2O75325 713 aa11.02□□□□□ -0.64
C9orf43-201ENST00000288462 PRLRP16471 622 aa11.02□□□□□ -0.64
C9orf43-201ENST00000288462 EFNA5P52803 228 aa11.02□□□□□ -0.64
C9orf43-201ENST00000288462 TUBB4BP68371 445 aa11.02□□□□□ -0.64
C9orf43-201ENST00000288462 LAMC2Q13753 1193 aa11.02□□□□□ -0.64
C9orf43-201ENST00000288462 ALKBH5Q6P6C2 394 aaKnown RBP11.02□□□□□ -0.64
C9orf43-201ENST00000288462 ZPBP2Q6X784 338 aa11.02□□□□□ -0.64
C9orf43-201ENST00000288462 GPR142Q7Z601 462 aa11.02□□□□□ -0.64
C9orf43-201ENST00000288462 GPR161Q8N6U8 529 aaKnown RBP11.02□□□□□ -0.64
C9orf43-201ENST00000288462 PRPF31Q8WWY3 499 aaKnown RBP11.02□□□□□ -0.64
C9orf43-201ENST00000288462 JPH2Q9BR39 696 aaPredicted RBP11.02□□□□□ -0.64
C9orf43-201ENST00000288462 UBE2TQ9NPD8 197 aaPredicted RBP11.02□□□□□ -0.64
C9orf43-201ENST00000288462 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.02□□□□□ -0.64
C9orf43-201ENST00000288462 PUF60Q9UHX1 559 aaKnown RBP11.02□□□□□ -0.64
C9orf43-201ENST00000288462 AGO2Q9UKV8 859 aaKnown RBP11.02□□□□□ -0.64
C9orf43-201ENST00000288462 A0A0B4J269 797 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 CTAGE15A4D2H0 777 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 FOXN3O00409 490 aaPredicted RBP11.02□□□□□ -0.65
C9orf43-201ENST00000288462 HBP1O60381 514 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms