RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ACOT2P49753 483 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 CDK17Q00537 523 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 LAMC2Q13753 1193 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 EMC2Q15006 297 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 TAF1BQ53T94 588 aaPredicted RBP19.74■□□□□ 0.75
PCDH1-201ENST00000287008 ZDHHC15Q96MV8 337 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 NUP85Q9BW27 656 aa19.74■□□□□ 0.75
PCDH1-201ENST00000287008 MMP14P50281 582 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 NUDT18Q6ZVK8 323 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 ZMYND12Q9H0C1 365 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 GTF2A1P52655 376 aaPredicted RBP19.73■□□□□ 0.75
PCDH1-201ENST00000287008 SLC12A1Q13621 1099 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 DGKDQ16760 1214 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 MOV10L1Q9BXT6 1211 aaKnown RBP19.73■□□□□ 0.75
PCDH1-201ENST00000287008 DHX35Q9H5Z1 703 aaKnown RBP19.73■□□□□ 0.75
PCDH1-201ENST00000287008 VCX3AQ9NNX9 186 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 DNAJC17Q9NVM6 304 aaKnown RBP19.73■□□□□ 0.75
PCDH1-201ENST00000287008 HSPBP1Q9NZL4 362 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 IQANK1A0A1B0GTG1 560 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 TTC26A0AVF1 554 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 UPP2O95045 317 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 CA4P22748 312 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 NME3Q13232 169 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 GLYCTKQ8IVS8 523 aa19.73■□□□□ 0.75
PCDH1-201ENST00000287008 FOXN1O15353 648 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 VEGFAP15692 232 aaPredicted RBP19.72■□□□□ 0.75
PCDH1-201ENST00000287008 FCGRTP55899 365 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 CUL1Q13616 776 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 NAA25Q14CX7 972 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 RRN3P2A6NIE6 340 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 SLC26A4O43511 780 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 EIF3BP55884 814 aaKnown RBP19.72■□□□□ 0.75
PCDH1-201ENST00000287008 ANTXR2P58335 489 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 GFPT1Q06210 699 aaPredicted RBP19.72■□□□□ 0.75
PCDH1-201ENST00000287008 CXCL9Q07325 125 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 NFIAQ12857 509 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 RNF180Q86T96 592 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 DCCP43146 1447 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 MYBL1P10243 752 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 EPHX2P34913 555 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 TMEM132DQ14C87 1099 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 ACCSLQ4AC99 568 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 HEATR6Q6AI08 1181 aaKnown RBP19.72■□□□□ 0.75
PCDH1-201ENST00000287008 SPATA2LQ8IUW3 424 aaPredicted RBP19.72■□□□□ 0.75
PCDH1-201ENST00000287008 SDCCAG3Q96C92 435 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 REEP2Q9BRK0 252 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 PRMT7Q9NVM4 692 aaPredicted RBP19.72■□□□□ 0.75
PCDH1-201ENST00000287008 TOM1L1O75674 476 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 CHEK2O96017 543 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 PLS3P13797 630 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 STILQ15468 1287 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 SPATS2Q86XZ4 545 aaKnown RBP19.72■□□□□ 0.75
PCDH1-201ENST00000287008 ASIC4Q96FT7 647 aa19.72■□□□□ 0.75
PCDH1-201ENST00000287008 RHOT1Q8IXI2 618 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 CEP120Q8N960 986 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 KCNH7Q9NS40 1196 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 SNX24Q9Y343 169 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 FIS1Q9Y3D6 152 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 A0A1W2PQC6 194 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 ANO9A1A5B4 782 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 POLRMTO00411 1230 aaKnown RBP19.71■□□□□ 0.75
PCDH1-201ENST00000287008 ZSCAN26Q16670 478 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 ANKRD40Q6AI12 368 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 APPL2Q8NEU8 664 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 SP110Q9HB58 689 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 PIK3C2BO00750 1634 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 H3BRJ5 948 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 ATP8B1O43520 1251 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 ACSL3O95573 720 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 GCLCP48506 637 aaPredicted RBP19.71■□□□□ 0.75
PCDH1-201ENST00000287008 TMEM62Q0P6H9 643 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 ACER1Q8TDN7 264 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 GBA2Q9HCG7 927 aaPredicted RBP19.71■□□□□ 0.75
PCDH1-201ENST00000287008 TJP2Q9UDY2 1190 aa19.71■□□□□ 0.75
PCDH1-201ENST00000287008 CASP2P42575 452 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 PLA2G4FQ68DD2 849 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 FAM117BQ6P1L5 589 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 SAYSD1Q9NPB0 183 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 BFARQ9NZS9 450 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 A0A1B0GUA9 196 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 TTI1O43156 1089 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 TTC4O95801 387 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 RPA1P27694 616 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 CPT1AP50416 773 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 TAP1Q03518 808 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 RCN2Q14257 317 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 KCTD17Q8N5Z5 321 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 SCG3Q8WXD2 468 aaKnown RBP19.7■□□□□ 0.74
PCDH1-201ENST00000287008 ALKBH8Q96BT7 664 aaKnown RBP19.7■□□□□ 0.74
PCDH1-201ENST00000287008 SLC38A7Q9NVC3 462 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 CNTNAP5Q8WYK1 1306 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 CD4P01730 458 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 ITGA4P13612 1032 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 SLC7A5Q01650 507 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 TRIM67Q6ZTA4 783 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 NPHP3-ACAD11A0A0J9YXS1 232 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 TEX33O43247 280 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 KRT38O76015 456 aa19.7■□□□□ 0.74
PCDH1-201ENST00000287008 RGS2P41220 211 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms