RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 OR6B3Q8NGW1 331 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 SCFD1Q8WVM8 642 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 TMEM245Q9H330 911 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 SPAG6O75602 509 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 VHLP40337 213 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 RECQLP46063 649 aaPredicted RBP9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 MRPS25P82663 173 aaKnown RBP9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 MXD4Q14582 209 aaPredicted RBP9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 DDHD1Q8NEL9 900 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 CCT7Q99832 543 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 EGFL8Q99944 293 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 BHMT2Q9H2M3 363 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 ZHX2Q9Y6X8 837 aa9.21□□□□□ -0.93
SCUBE3-201ENST00000274938 ESYT3A0FGR9 886 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 ENO4A6NNW6 628 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 SEC24DO94855 1032 aaPredicted RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 ENO1P06733 434 aaKnown RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 RALBP11234 206 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 NUP107P57740 925 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 KCNH2Q12809 1159 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 NECTIN1Q15223 517 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 FASTKD1Q53R41 847 aaKnown RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 BBS7Q8IWZ6 715 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 THEM5Q8N1Q8 247 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 PRMT1Q99873 361 aaKnown RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 C11orf70Q9BRQ4 267 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 ITIH2P19823 946 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 RBBP7Q16576 425 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 KHDRBS2Q5VWX1 349 aaKnown RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 OLFML2BQ68BL8 750 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 ANKS3Q6ZW76 656 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 FMR1NBQ8N0W7 255 aaPredicted RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 RIBC1Q8N443 379 aaPredicted RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 TNIP2Q8NFZ5 429 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 FAM129AQ9BZQ8 928 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 HPCAL4Q9UM19 191 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 AP4S1Q9Y587 144 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 PTPRTO14522 1441 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 AKAP10O43572 662 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 CHN1P15882 459 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 HIF1AQ16665 826 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 UNC5CLQ8IV45 518 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 TRMT2AQ8IZ69 625 aaKnown RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 RNF25Q96BH1 459 aaPredicted RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 ZNF556Q9HAH1 456 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 ZCCHC17Q9NP64 241 aaKnown RBP9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 OLFML3Q9NRN5 406 aa9.21□□□□□ -0.94
SCUBE3-201ENST00000274938 ZBTB22O15209 634 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 NCK2O43639 380 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 ALDH18A1P54886 795 aaKnown RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 KRT17Q04695 432 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 KPNB1Q14974 876 aaKnown RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 UGP2Q16851 508 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 EFHC2Q5JST6 749 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 TRPM8Q7Z2W7 1104 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 HDDC2Q7Z4H3 204 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 SH3TC2Q8TF17 1288 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 ARL8AQ96BM9 186 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 SFMBT1Q9UHJ3 866 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 SNX12Q9UMY4 172 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 PSMA3P25788 255 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 VSNL1P62760 191 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 UBXN2AP68543 259 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 STX3Q13277 289 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 GUF1Q8N442 669 aaKnown RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 B4GALNT2Q8NHY0 566 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 DTX3LQ8TDB6 740 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 TSPAN17Q96FV3 270 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 ZFYVE19Q96K21 471 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 PSMC3IPQ9P2W1 217 aaPredicted RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 KCNQ4P56696 695 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 TRIM16LQ309B1 348 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 KIAA1841Q6NSI8 718 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 KCTD1Q719H9 257 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 EFL1Q7Z2Z2 1120 aaKnown RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 NLRP10Q86W26 655 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 HIC2Q96JB3 615 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 SEC16BQ96JE7 1060 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 TOPORSQ9NS56 1045 aaPredicted RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 NSMCE4AQ9NXX6 385 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 TTC7AQ9ULT0 858 aaPredicted RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 HEY1Q9Y5J3 304 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 PHKG2P15735 406 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 PRAMEP78395 509 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 KDSRQ06136 332 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 TRIP10Q15642 601 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 ZNF699Q32M78 642 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 COA7Q96BR5 231 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 SLC9A2Q9UBY0 812 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 SERPINB13Q9UIV8 391 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 FAM32AQ9Y421 112 aaKnown RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 LZTS3O60299 673 aaPredicted RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 ATP1A1P05023 1023 aaKnown RBP9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 APOA4P06727 396 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 CDC25AP30304 524 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 CRYMQ14894 314 aa9.2□□□□□ -0.94
SCUBE3-201ENST00000274938 SFR1Q86XK3 245 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms