RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 REC8O95072 547 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 LARGE1O95461 756 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 CXCL14O95715 111 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 FDPSP14324 419 aaKnown RBP10.03□□□□□ -0.8
TPM3-201ENST00000271850 SFPQP23246 707 aaKnown RBP eCLIP10.03□□□□□ -0.8
TPM3-201ENST00000271850 AVPR2P30518 371 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 KRT17Q04695 432 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 NOMO2Q5JPE7 1267 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 KIAA1841Q6NSI8 718 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 TAS1R1Q7RTX1 841 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 MRPL10Q7Z7H8 261 aaKnown RBP10.03□□□□□ -0.8
TPM3-201ENST00000271850 RNF168Q8IYW5 571 aaPredicted RBP10.03□□□□□ -0.8
TPM3-201ENST00000271850 TMEM105Q8N8V8 129 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 SMG8Q8ND04 991 aaKnown RBP10.03□□□□□ -0.8
TPM3-201ENST00000271850 TMEM169Q96HH4 297 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 RIPOR3Q96MK2 946 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 EIF2AQ9BY44 585 aaKnown RBP10.03□□□□□ -0.8
TPM3-201ENST00000271850 TSHZ2Q9NRE2 1034 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 MIOSQ9NXC5 875 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 PCDHB2Q9Y5E7 798 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 COL4A3BPQ9Y5P4 624 aa10.03□□□□□ -0.8
TPM3-201ENST00000271850 EPB41L2O43491 1005 aaKnown RBP10.02□□□□□ -0.81
TPM3-201ENST00000271850 N4BP1O75113 896 aaKnown RBP10.02□□□□□ -0.81
TPM3-201ENST00000271850 QARSP47897 775 aaKnown RBP10.02□□□□□ -0.81
TPM3-201ENST00000271850 ALDH7A1P49419 539 aaKnown RBP10.02□□□□□ -0.81
TPM3-201ENST00000271850 CLCN4P51793 760 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 ITIH3Q06033 890 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 LAMTOR4Q0VGL1 99 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 ST3GAL1Q11201 340 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 NR5A1Q13285 461 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 CTTNQ14247 550 aaKnown RBP10.02□□□□□ -0.81
TPM3-201ENST00000271850 AMHR2Q16671 573 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 PIK3AP1Q6ZUJ8 805 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 CATSPER4Q7RTX7 472 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 KRT25Q7Z3Z0 450 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 TRIM22Q8IYM9 498 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 PRPF31Q8WWY3 499 aaKnown RBP10.02□□□□□ -0.81
TPM3-201ENST00000271850 DYDC2Q96IM9 177 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 KLHL5Q96PQ7 755 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 LXNQ9BS40 222 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 GBP3Q9H0R5 595 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 IL21Q9HBE4 155 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 CYP46A1Q9Y6A2 500 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 STK36Q9NRP7 1315 aa10.02□□□□□ -0.81
TPM3-201ENST00000271850 INPPL1O15357 1258 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 TSPAN1O60635 241 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 PFKFB2O60825 505 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 SLITRK3O94933 977 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 POMCP01189 267 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 P4HBP07237 508 aaKnown RBP10.01□□□□□ -0.81
TPM3-201ENST00000271850 CNPP09543 421 aaKnown RBP10.01□□□□□ -0.81
TPM3-201ENST00000271850 SRGAP2CP0DJJ0 459 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 SRGAP2BP0DMP2 458 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 YWHABP31946 246 aaKnown RBP10.01□□□□□ -0.81
TPM3-201ENST00000271850 POLGP54098 1239 aaPredicted RBP10.01□□□□□ -0.81
TPM3-201ENST00000271850 CYP4A11Q02928 519 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 EMC2Q15006 297 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 EPHA7Q15375 998 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 TPRNQ4KMQ1 711 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 CWF19L1Q69YN2 538 aaKnown RBP10.01□□□□□ -0.81
TPM3-201ENST00000271850 ZNF787Q6DD87 383 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 GALNT17Q6IS24 598 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 GLB1LQ6UWU2 654 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 TMC5Q6UXY8 1006 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 NEK8Q86SG6 692 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 FERMT3Q86UX7 667 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 SUGP1Q8IWZ8 645 aaKnown RBP10.01□□□□□ -0.81
TPM3-201ENST00000271850 C4orf19Q8IY42 314 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 COLGALT2Q8IYK4 626 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 FAM177A1Q8N128 213 aaPredicted RBP10.01□□□□□ -0.81
TPM3-201ENST00000271850 GSTCDQ8NEC7 633 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 ASAP3Q8TDY4 903 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 CEP170P1Q96L14 293 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 FAM20AQ96MK3 541 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 RSAD1Q9HA92 442 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 PDRG1Q9NUG6 133 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 SORCS3Q9UPU3 1222 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 HES2Q9Y543 173 aa10.01□□□□□ -0.81
TPM3-201ENST00000271850 A0A087WWV3 80 aa10□□□□□ -0.81
TPM3-201ENST00000271850 H0Y858 1186 aa10□□□□□ -0.81
TPM3-201ENST00000271850 DPYSL4O14531 572 aa10□□□□□ -0.81
TPM3-201ENST00000271850 NRP1O14786 923 aa10□□□□□ -0.81
TPM3-201ENST00000271850 CPLX1O14810 134 aa10□□□□□ -0.81
TPM3-201ENST00000271850 CCNT1O60563 726 aaKnown RBP10□□□□□ -0.81
TPM3-201ENST00000271850 SSBP05455 408 aaKnown RBP eCLIP10□□□□□ -0.81
TPM3-201ENST00000271850 NPR3P17342 541 aa10□□□□□ -0.81
TPM3-201ENST00000271850 NCLP19338 710 aaKnown RBP10□□□□□ -0.81
TPM3-201ENST00000271850 CA8P35219 290 aa10□□□□□ -0.81
TPM3-201ENST00000271850 MTHFRP42898 656 aa10□□□□□ -0.81
TPM3-201ENST00000271850 DNM2P50570 870 aa10□□□□□ -0.81
TPM3-201ENST00000271850 RAB27AP51159 221 aa10□□□□□ -0.81
TPM3-201ENST00000271850 CDC42EP1Q00587 391 aa10□□□□□ -0.81
TPM3-201ENST00000271850 DSC1Q08554 894 aa10□□□□□ -0.81
TPM3-201ENST00000271850 SRGAP1Q7Z6B7 1085 aa10□□□□□ -0.81
TPM3-201ENST00000271850 GPR149Q86SP6 731 aa10□□□□□ -0.81
TPM3-201ENST00000271850 ZDHHC14Q8IZN3 488 aa10□□□□□ -0.81
TPM3-201ENST00000271850 RNF149Q8NC42 400 aa10□□□□□ -0.81
TPM3-201ENST00000271850 PSPC1Q8WXF1 523 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms