RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 SLC17A8Q8NDX2 589 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 ZNF564Q8TBZ8 553 aaPredicted RBP12.88□□□□□ -0.35
ERBB2-201ENST00000269571 DYTNA2CJ06 578 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 KLHL33A6NCF5 533 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 KRT17Q04695 432 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 CYLC2Q14093 348 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-201ENST00000269571 NTRK3Q16288 839 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-201ENST00000269571 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 SEPT10Q9P0V9 454 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 AGTP01019 485 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
ERBB2-201ENST00000269571 ARFIP2P53365 341 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 Q4G0T1 1027 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 CENPUQ71F23 418 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 LCA5Q86VQ0 697 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 PRPF31Q8WWY3 499 aaKnown RBP12.87□□□□□ -0.35
ERBB2-201ENST00000269571 C11orf70Q9BRQ4 267 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 FIS1Q9Y3D6 152 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 SH3BP1Q9Y3L3 701 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 CLDN3O15551 220 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 DNAJC6O75061 913 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 GSTA2P09210 222 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 IGBP1P78318 339 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 TNFAIP1Q13829 316 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 SYCP2LQ5T4T6 812 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 AGBL2Q5U5Z8 902 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 CLEC10AQ8IUN9 316 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 EPS8L3Q8TE67 593 aaKnown RBP12.87□□□□□ -0.35
ERBB2-201ENST00000269571 RUBCNQ92622 972 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 GFM2Q969S9 779 aaKnown RBP12.87□□□□□ -0.35
ERBB2-201ENST00000269571 SCYL1Q96KG9 808 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 ERGIC2Q96RQ1 377 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 NPHS2Q9NP85 383 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 MAP2P11137 1827 aaKnown RBP12.87□□□□□ -0.35
ERBB2-201ENST00000269571 ARHGAP4P98171 946 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 ANKRD20A8PQ5CZ79 823 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 ZBED8Q8IZ13 594 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 EDEM3Q9BZQ6 932 aa12.87□□□□□ -0.35
ERBB2-201ENST00000269571 SYNJ2BP-COX16A0A087WUM0 186 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ATMINO43313 823 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 STK10O94804 968 aaKnown RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 UBOX5O94941 541 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ITGA4P13612 1032 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 RCAN1P53805 252 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 KDSRQ06136 332 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 DNAJC3Q13217 504 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 RGS9BPQ6ZS82 235 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 CXorf38Q8TB03 319 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 KCND1Q9NSA2 647 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 COX16Q9P0S2 106 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ARHGAP10A1A4S6 786 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 UBTFL6P0CB48 400 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 NMT1P30419 496 aaKnown RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 AOC3Q16853 763 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 BRDTQ58F21 947 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 CCDC80Q76M96 950 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 BZW1Q7L1Q6 419 aaKnown RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 SLC30A5Q8TAD4 765 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ERP44Q9BS26 406 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 CARD9Q9H257 536 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ZWILCHQ9H900 591 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 TMBIM4Q9HC24 238 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 KLHL11Q9NVR0 708 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 C2CD2Q9Y426 696 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 JCADQ9P266 1359 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 NQO1P15559 274 aaKnown RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 CPA2P48052 419 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 USP11P51784 963 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ESRRGP62508 458 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ASPHQ12797 758 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 GPS1Q13098 491 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 TTMPQ5BVD1 217 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 IZUMO3Q5VZ72 239 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ARHGAP27Q6ZUM4 889 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 YTHDF3Q7Z739 585 aaKnown RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ANKMY2Q8IV38 441 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 ZBTB8OSQ8IWT0 167 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 RNF169Q8NCN4 708 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 FAM84BQ96KN1 310 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-201ENST00000269571 CEP170P1Q96L14 293 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 NACC1Q96RE7 527 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 SATB2Q9UPW6 733 aa12.86□□□□□ -0.35
ERBB2-201ENST00000269571 PNMA6FA0A0J9YX94 578 aa12.85□□□□□ -0.35
ERBB2-201ENST00000269571 CRCPO75575 148 aa12.85□□□□□ -0.35
ERBB2-201ENST00000269571 CAMTA2O94983 1202 aa12.85□□□□□ -0.35
ERBB2-201ENST00000269571 TARSP26639 723 aaKnown RBP12.85□□□□□ -0.35
ERBB2-201ENST00000269571 SNX16P57768 344 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms