RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 TRAIPQ9BWF2 469 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 STRA6Q9BX79 667 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 RNF39Q9H2S5 420 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 TMEM161AQ9NX61 479 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 LRFN2Q9ULH4 789 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 HES2Q9Y543 173 aa14.02□□□□□ -0.16
SS18-202ENST00000269138 TTC3P53804 2025 aa14.02□□□□□ -0.17
SS18-202ENST00000269138 PVALEFA0A1B0GWK0 134 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 H0YCG3 227 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 N4BP3O15049 544 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 ZNF623O75123 536 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 PPP1R37O75864 691 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 GCNT3O95395 438 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 STAG3L1P0CL83 205 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 HTRA4P83105 476 aaPredicted RBP14.01□□□□□ -0.17
SS18-202ENST00000269138 EHHADHQ08426 723 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 KCNA1Q09470 495 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 DPYDQ12882 1025 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 PNOCQ13519 176 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 KMT5BQ4FZB7 885 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 SLC27A1Q6PCB7 646 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 MRPL10Q7Z7H8 261 aaKnown RBP14.01□□□□□ -0.17
SS18-202ENST00000269138 ERCC4Q92889 916 aaPredicted RBP14.01□□□□□ -0.17
SS18-202ENST00000269138 KCNN1Q92952 543 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 CCDC51Q96ER9 411 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 RAD9AQ99638 391 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 MRPL4Q9BYD3 311 aaKnown RBP14.01□□□□□ -0.17
SS18-202ENST00000269138 NKX2-4Q9H2Z4 354 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 ST6GALNAC4Q9H4F1 302 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 ELAC1Q9H777 363 aaKnown RBP14.01□□□□□ -0.17
SS18-202ENST00000269138 PTPRHQ9HD43 1115 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 OLFML3Q9NRN5 406 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 PCDHA11Q9Y5I1 949 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 MYH11P35749 1972 aa14.01□□□□□ -0.17
SS18-202ENST00000269138 ABLIM1O14639 778 aa14□□□□□ -0.17
SS18-202ENST00000269138 DGKIO75912 1065 aa14□□□□□ -0.17
SS18-202ENST00000269138 PRPF6O94906 941 aaKnown RBP14□□□□□ -0.17
SS18-202ENST00000269138 RPN1P04843 607 aaKnown RBP14□□□□□ -0.17
SS18-202ENST00000269138 POSTNQ15063 836 aa14□□□□□ -0.17
SS18-202ENST00000269138 PAN2Q504Q3 1202 aaKnown RBP14□□□□□ -0.17
SS18-202ENST00000269138 CLLU1OSQ5K130 101 aa14□□□□□ -0.17
SS18-202ENST00000269138 FAM26FQ5R3K3 315 aa14□□□□□ -0.17
SS18-202ENST00000269138 KANK3Q6NY19 840 aa14□□□□□ -0.17
SS18-202ENST00000269138 ZBTB33Q86T24 672 aa14□□□□□ -0.17
SS18-202ENST00000269138 ZNF689Q96CS4 500 aaPredicted RBP14□□□□□ -0.17
SS18-202ENST00000269138 TIGD1Q96MW7 591 aa14□□□□□ -0.17
SS18-202ENST00000269138 YME1L1Q96TA2 773 aa14□□□□□ -0.17
SS18-202ENST00000269138 NXF3Q9H4D5 531 aaKnown RBP14□□□□□ -0.17
SS18-202ENST00000269138 RC3H2Q9HBD1 1191 aaKnown RBP14□□□□□ -0.17
SS18-202ENST00000269138 SLC39A2Q9NP94 309 aa14□□□□□ -0.17
SS18-202ENST00000269138 TNFSF13BQ9Y275 285 aa14□□□□□ -0.17
SS18-202ENST00000269138 IPPQ9Y573 584 aa14□□□□□ -0.17
SS18-202ENST00000269138 LAMA2P24043 3122 aaKnown RBP14□□□□□ -0.17
SS18-202ENST00000269138 TISP43B9A030 160 aa14□□□□□ -0.17
SS18-202ENST00000269138 ANKRD63C9JTQ0 380 aa14□□□□□ -0.17
SS18-202ENST00000269138 KINO60870 393 aaKnown RBP14□□□□□ -0.17
SS18-202ENST00000269138 EOMESO95936 686 aa14□□□□□ -0.17
SS18-202ENST00000269138 MYL1P05976 194 aa14□□□□□ -0.17
SS18-202ENST00000269138 CA3P07451 260 aa14□□□□□ -0.17
SS18-202ENST00000269138 PROZP22891 400 aa14□□□□□ -0.17
SS18-202ENST00000269138 DNAJB2P25686 324 aa14□□□□□ -0.17
SS18-202ENST00000269138 RAB27AP51159 221 aa14□□□□□ -0.17
SS18-202ENST00000269138 RAB30Q15771 203 aa14□□□□□ -0.17
SS18-202ENST00000269138 SLC39A4Q6P5W5 647 aa14□□□□□ -0.17
SS18-202ENST00000269138 AGMOQ6ZNB7 445 aa14□□□□□ -0.17
SS18-202ENST00000269138 SPRED2Q7Z698 418 aa14□□□□□ -0.17
SS18-202ENST00000269138 MAP4K3Q8IVH8 894 aa14□□□□□ -0.17
SS18-202ENST00000269138 SLC17A8Q8NDX2 589 aa14□□□□□ -0.17
SS18-202ENST00000269138 BICD1Q96G01 975 aa14□□□□□ -0.17
SS18-202ENST00000269138 APOL6Q9BWW8 343 aa14□□□□□ -0.17
SS18-202ENST00000269138 TRIM6Q9C030 488 aaPredicted RBP14□□□□□ -0.17
SS18-202ENST00000269138 HAPLN2Q9GZV7 340 aa14□□□□□ -0.17
SS18-202ENST00000269138 CDT1Q9H211 546 aa14□□□□□ -0.17
SS18-202ENST00000269138 MSRAQ9UJ68 235 aa14□□□□□ -0.17
SS18-202ENST00000269138 INSL6Q9Y581 213 aa14□□□□□ -0.17
SS18-202ENST00000269138 TBKBP1A7MCY6 615 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 SKIP12755 728 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 AKAP5P24588 427 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 HOXD13P35453 343 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 AFF1P51825 1210 aaKnown RBP13.99□□□□□ -0.17
SS18-202ENST00000269138 STK4Q13043 487 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 L1TD1Q5T7N2 865 aaKnown RBP13.99□□□□□ -0.17
SS18-202ENST00000269138 ZPBP2Q6X784 338 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 EPM2AIP1Q7L775 607 aaPredicted RBP13.99□□□□□ -0.17
SS18-202ENST00000269138 HELQQ8TDG4 1101 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 TIFAQ96CG3 184 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 CASD1Q96PB1 797 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 TCHPQ9BT92 498 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 EXOC1Q9NV70 894 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 ANKFY1Q9P2R3 1169 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 HCSTQ9UBK5 93 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
SS18-202ENST00000269138 LAMA3Q16787 3333 aa13.98□□□□□ -0.17
SS18-202ENST00000269138 COL4A6Q14031 1691 aa13.98□□□□□ -0.17
SS18-202ENST00000269138 HNRNPDLO14979 420 aaKnown RBP13.98□□□□□ -0.17
SS18-202ENST00000269138 TOM1L1O75674 476 aa13.98□□□□□ -0.17
SS18-202ENST00000269138 PIGRP01833 764 aa13.98□□□□□ -0.17
SS18-202ENST00000269138 HARSP12081 509 aaKnown RBP13.98□□□□□ -0.17
SS18-202ENST00000269138 ITGA4P13612 1032 aa13.98□□□□□ -0.17
SS18-202ENST00000269138 SCP2P22307 547 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms