RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 BEND6Q5SZJ8 279 aaPredicted RBP13.34□□□□□ -0.27
CDH11-201ENST00000268603 SEPT5Q99719 369 aaPredicted RBP13.34□□□□□ -0.27
CDH11-201ENST00000268603 KLHL31Q9H511 634 aa13.34□□□□□ -0.27
CDH11-201ENST00000268603 DHX35Q9H5Z1 703 aaKnown RBP13.34□□□□□ -0.27
CDH11-201ENST00000268603 CYP26B1Q9NR63 512 aa13.34□□□□□ -0.27
CDH11-201ENST00000268603 USP19O94966 1318 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 RNF123Q5XPI4 1314 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 FAM47DPA6NHR8 397 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 SDC4P31431 198 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 RBL2Q08999 1139 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 MTMR1Q13613 665 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 RFX8Q6ZV50 586 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 JADE3Q92613 823 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 OTUD5Q96G74 571 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 FMO2Q99518 471 aa13.33□□□□□ -0.27
CDH11-201ENST00000268603 ABCC4O15439 1325 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 ATXN3P54252 364 aaPredicted RBP13.33□□□□□ -0.28
CDH11-201ENST00000268603 IYDQ6PHW0 289 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
CDH11-201ENST00000268603 ELAC2Q9BQ52 826 aaKnown RBP13.33□□□□□ -0.28
CDH11-201ENST00000268603 RASSF9O75901 435 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 IL10P22301 178 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 ME3Q16798 604 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 TMEM270Q6UE05 265 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 SAAL1Q96ER3 474 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 SPATA33Q96N06 139 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 FAM213AQ9BRX8 229 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 NEUROD4Q9HD90 331 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 SERPINB13Q9UIV8 391 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 PNMA8BQ9ULN7 279 aaPredicted RBP13.33□□□□□ -0.28
CDH11-201ENST00000268603 MAP3K19Q56UN5 1328 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 TNPO2O14787 897 aaKnown RBP13.33□□□□□ -0.28
CDH11-201ENST00000268603 NDUFA8P51970 172 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 ALDH18A1P54886 795 aaKnown RBP13.33□□□□□ -0.28
CDH11-201ENST00000268603 RTKN2Q8IZC4 609 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 FAM167AQ96KS9 214 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 LATS2Q9NRM7 1088 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 HOXC10Q9NYD6 342 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 PPIEQ9UNP9 301 aaKnown RBP13.33□□□□□ -0.28
CDH11-201ENST00000268603 NEURL1BA8MQ27 555 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 ANO5Q75V66 913 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 ZNF302Q9NR11 478 aa13.33□□□□□ -0.28
CDH11-201ENST00000268603 LRRIQ3A6PVS8 624 aaPredicted RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 BRAFP15056 766 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 TTLL6Q8N841 843 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 NEK9Q8TD19 979 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 GINS4Q9BRT9 223 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 BBS2Q9BXC9 721 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 FHDC1Q9C0D6 1143 aaPredicted RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 PCDHGA4Q9Y5G9 962 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 ADGRA2Q96PE1 1338 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 CRKLP46109 303 aaKnown RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 NBPF15Q8N660 670 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 PIK3R5Q8WYR1 880 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 GALNT8Q9NY28 637 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 PIM2Q9P1W9 311 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 TCOF1Q13428 1488 aaKnown RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 CAPN15O75808 1086 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 SERPING1P05155 500 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 GCFC2P16383 781 aaKnown RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 COPB2P35606 906 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 SNRNP48Q6IEG0 339 aaKnown RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 MCM8Q9UJA3 840 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 SOX13Q9UN79 622 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 PZPP20742 1482 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 CTIFO43310 598 aaKnown RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 DYRK3O43781 588 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 FAM107AO95990 144 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 TFRCP02786 760 aaKnown RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 TFDP2Q14188 446 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDH11-201ENST00000268603 ZNF438Q7Z4V0 828 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 ARL8AQ96BM9 186 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 DHTKD1Q96HY7 919 aaPredicted RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 EXOSC4Q9NPD3 245 aaKnown RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 A0A087WUV0 522 aaPredicted RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 KCNQ4P56696 695 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 SEMA3FQ13275 785 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 SGO1Q5FBB7 561 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 HAUS6Q7Z4H7 955 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 BBS7Q8IWZ6 715 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 ASAP3Q8TDY4 903 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 SCFD1Q8WVM8 642 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 TUBGCP3Q96CW5 907 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 TSC22D4Q9Y3Q8 395 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 CTSHP09668 335 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 JAK3P52333 1124 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 C6orf10Q5SRN2 563 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 BRD8Q9H0E9 1235 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 DHX36Q9H2U1 1008 aaKnown RBP13.32□□□□□ -0.28
CDH11-201ENST00000268603 SLAIN2Q9P270 581 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 AATKQ6ZMQ8 1374 aa13.32□□□□□ -0.28
CDH11-201ENST00000268603 HPGDP15428 266 aa13.31□□□□□ -0.28
CDH11-201ENST00000268603 YWHAZP63104 245 aaKnown RBP13.31□□□□□ -0.28
CDH11-201ENST00000268603 CYTH1Q15438 398 aa13.31□□□□□ -0.28
CDH11-201ENST00000268603 LRRC24Q50LG9 513 aa13.31□□□□□ -0.28
CDH11-201ENST00000268603 HORMAD1Q86X24 394 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms