RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 UBN1Q9NPG3 1134 aa18.26■□□□□ 0.51
SRF-201ENST00000265354 TLR2O60603 784 aa18.26■□□□□ 0.51
SRF-201ENST00000265354 SAT1P21673 171 aa18.26■□□□□ 0.51
SRF-201ENST00000265354 VAMP7P51809 220 aa18.26■□□□□ 0.51
SRF-201ENST00000265354 MAP7Q14244 749 aa18.26■□□□□ 0.51
SRF-201ENST00000265354 KCNV1Q6PIU1 500 aa18.26■□□□□ 0.51
SRF-201ENST00000265354 JDP2Q8WYK2 163 aa18.26■□□□□ 0.51
SRF-201ENST00000265354 RUSC1Q9BVN2 902 aa18.26■□□□□ 0.51
SRF-201ENST00000265354 STK33Q9BYT3 514 aa18.26■□□□□ 0.51
SRF-201ENST00000265354 F5H6K3 240 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 CDR2Q01850 454 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 KLRC3Q07444 240 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 CCDC124Q96CT7 223 aaKnown RBP18.25■□□□□ 0.51
SRF-201ENST00000265354 SHISA4Q96DD7 197 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 OSBPL7Q9BZF2 842 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 APEX2Q9UBZ4 518 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 MARCOQ9UEW3 520 aaPredicted RBP18.25■□□□□ 0.51
SRF-201ENST00000265354 CCDC195A0A1B0GUA6 201 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 DDX3XO00571 662 aaKnown RBP eCLIP18.25■□□□□ 0.513e-6■□□□□ 10.9
SRF-201ENST00000265354 ATP2B4P23634 1241 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 COPS2P61201 443 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 SPDYE1Q8NFV5 336 aaPredicted RBP18.25■□□□□ 0.51
SRF-201ENST00000265354 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 RBM15Q96T37 977 aaKnown RBP eCLIP18.25■□□□□ 0.518e-12■■■■□ 21.1
SRF-201ENST00000265354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.25■□□□□ 0.51
SRF-201ENST00000265354 TRPC6Q9Y210 931 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 MYO3BQ8WXR4 1341 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 F5H423 210 aaPredicted RBP18.25■□□□□ 0.51
SRF-201ENST00000265354 KIF3CO14782 793 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 PHF2O75151 1096 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 EIF2AK2P19525 551 aaKnown RBP18.25■□□□□ 0.51
SRF-201ENST00000265354 MSL3Q8N5Y2 521 aaKnown RBP18.25■□□□□ 0.51
SRF-201ENST00000265354 ACSF2Q96CM8 615 aaPredicted RBP18.25■□□□□ 0.51
SRF-201ENST00000265354 FAM161BQ96MY7 647 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 CSRNP1Q96S65 589 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
SRF-201ENST00000265354 ITGA8P53708 1063 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 EPHB1P54762 984 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 BRDTQ58F21 947 aaPredicted RBP18.25■□□□□ 0.51
SRF-201ENST00000265354 PADI6Q6TGC4 694 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 AGAP11Q8TF27 550 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 KRT35Q92764 455 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 PI4K2AQ9BTU6 479 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 ADAM22Q9P0K1 906 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 FLT1P17948 1338 aa18.25■□□□□ 0.51
SRF-201ENST00000265354 PIK3CAP42336 1068 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 OSTNP61366 133 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 ELF3P78545 371 aaPredicted RBP18.24■□□□□ 0.51
SRF-201ENST00000265354 ZNF543Q08ER8 600 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 PDIA2Q13087 525 aaKnown RBP18.24■□□□□ 0.51
SRF-201ENST00000265354 KIF22Q14807 665 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 SYT2Q8N9I0 419 aaPredicted RBP18.24■□□□□ 0.51
SRF-201ENST00000265354 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
SRF-201ENST00000265354 H7C0C1 242 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 ATP5OP48047 213 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 FXR2P51116 673 aaKnown RBP eCLIP18.24■□□□□ 0.51
SRF-201ENST00000265354 ALDH5A1P51649 535 aaPredicted RBP18.24■□□□□ 0.51
SRF-201ENST00000265354 XXYLT1Q8NBI6 393 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 ACTRT1Q8TDG2 376 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 FBXO41Q8TF61 875 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 ARHGEF26Q96DR7 871 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 PWWP2AQ96N64 755 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 ACCSQ96QU6 501 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 MYH10P35580 1976 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 PHBP35232 272 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 GRIK5Q16478 980 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 TNFRSF25Q93038 417 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 SLC13A1Q9BZW2 595 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 TAS2R14Q9NYV8 317 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 NR2E1Q9Y466 385 aa18.24■□□□□ 0.51
SRF-201ENST00000265354 KDSRQ06136 332 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 SYDE2Q5VT97 1194 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 TMEM154Q6P9G4 183 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 SCARA5Q6ZMJ2 495 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 LRRC55Q6ZSA7 311 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 MIEF2Q96C03 454 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 MMTAG2Q9BU76 263 aaKnown RBP18.23■□□□□ 0.51
SRF-201ENST00000265354 TMEM117Q9H0C3 514 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 ZNF711Q9Y462 761 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 GRIN2DO15399 1336 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 DMP1Q13316 513 aaPredicted RBP18.23■□□□□ 0.51
SRF-201ENST00000265354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.23■□□□□ 0.51
SRF-201ENST00000265354 CDC42EP4Q9H3Q1 356 aaKnown RBP18.23■□□□□ 0.51
SRF-201ENST00000265354 TRABDQ9H4I3 376 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 PNMA3Q9UL41 463 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 TRPA1O75762 1119 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 RPL21P46778 160 aaKnown RBP18.23■□□□□ 0.51
SRF-201ENST00000265354 NPY5RQ15761 445 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 SWT1Q5T5J6 900 aaKnown RBP18.23■□□□□ 0.51
SRF-201ENST00000265354 C4orf32Q8N8J7 132 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 NXF1Q9UBU9 619 aaKnown RBP18.23■□□□□ 0.51
SRF-201ENST00000265354 CCPG1Q9ULG6 757 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 SPATA31D1Q6ZQQ2 1576 aa18.23■□□□□ 0.51
SRF-201ENST00000265354 HNRNPCP07910 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
SRF-201ENST00000265354 EDRF1Q3B7T1 1238 aa18.22■□□□□ 0.51
SRF-201ENST00000265354 TMEM270Q6UE05 265 aa18.22■□□□□ 0.51
SRF-201ENST00000265354 CARD9Q9H257 536 aa18.22■□□□□ 0.51
SRF-201ENST00000265354 KMT5AQ9NQR1 393 aa18.22■□□□□ 0.51
SRF-201ENST00000265354 PCSK1NQ9UHG2 260 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms