RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 HAUS5O94927 633 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PLA2G4BP0C869 781 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 CDC25CP30307 473 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 GRIK3Q13003 919 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 TSGA10IPQ3SY00 556 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 ELMSAN1Q6PJG2 1045 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 NSMFQ6X4W1 530 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 B3GNT6Q6ZMB0 384 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 NOP9Q86U38 636 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 TGS1Q96RS0 853 aaKnown RBP6.05□□□□□ -1.44
VCAN-201ENST00000265077 ZCWPW1Q9H0M4 648 aa6.05□□□□□ -1.44
VCAN-201ENST00000265077 PFASO15067 1338 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 PALMO75781 387 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 CLCN2P51788 898 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 PPP2R5CQ13362 524 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 SLC5A9Q2M3M2 681 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 KLHL38Q2WGJ6 581 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 KCTD21Q4G0X4 260 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 DNAJC24Q6P3W2 148 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 FAM47EQ6ZV65 393 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 PI4K2BQ8TCG2 481 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 CCDC28BQ9BUN5 200 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 CD209Q9NNX6 404 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 CEP72Q9P209 647 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 TEKT2Q9UIF3 430 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 NPTXRO95502 500 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 MCL1Q07820 350 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 SDR42E1Q8WUS8 393 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ZFRQ96KR1 1074 aaKnown RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 TFCP2L1Q9NZI6 479 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 TRIM17Q9Y577 477 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 PCDHB6Q9Y5E3 794 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ABCA9Q8IUA7 1624 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 FRMPD2Q68DX3 1309 aaPredicted RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 DDX39AO00148 427 aaKnown RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 SRGAP2O75044 1071 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 BCAMP50895 628 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 FCHO2Q0JRZ9 810 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 NECTIN1Q15223 517 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 CERKLQ49MI3 558 aaPredicted RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 KCTD6Q8NC69 237 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ZFAND2BQ8WV99 257 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 THRAP3Q9Y2W1 955 aaKnown RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 MATN2O00339 956 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ATP1A3P13637 1013 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 PHKA1P46020 1223 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 FLOT2Q14254 428 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 CDH24Q86UP0 819 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 RBBP8NLQ8NC74 664 aaPredicted RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 ANKRD36BP1Q96IX9 119 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 STMN3Q9NZ72 180 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ZSWIM5Q9P217 1185 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 TLK1Q9UKI8 766 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 MED14O60244 1454 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 AP3B1O00203 1094 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ATP9AO75110 1047 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 SYF2O95926 243 aaKnown RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 CLPTM1O96005 669 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 KIF22Q14807 665 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 UNC13DQ70J99 1090 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 RDH13Q8NBN7 331 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 CCSER2Q9H7U1 834 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ATPIF1Q9UII2 106 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 LRRC7Q96NW7 1537 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 GOLGA8RI6L899 631 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 BBS5Q8N3I7 341 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 TTC13Q8NBP0 860 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 DTX3LQ8TDB6 740 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 CHN1P15882 459 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 TFDP1Q14186 410 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 TEDDM1Q5T9Z0 273 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 DHX40Q8IX18 779 aaKnown RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 CYP26B1Q9NR63 512 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ANKFY1Q9P2R3 1169 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 LEMD3Q9Y2U8 911 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ADGRG1Q9Y653 693 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 RHOBTB1O94844 696 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ATP6V1C1P21283 382 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 HMOX2P30519 316 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 SLCO1A2P46721 670 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 CYP4A11Q02928 519 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 SLFN13Q68D06 897 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 SCYL2Q6P3W7 929 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 SCAIQ8N9R8 606 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 KAT2BQ92831 832 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 MED10Q9BTT4 135 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 USP6P35125 1406 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 TTC3P53804 2025 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 TOM1L1O75674 476 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 BTKQ06187 659 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 REXO1L1PQ8IX06 675 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 FMR1NBQ8N0W7 255 aaPredicted RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 MMS19Q96T76 1030 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 SYBUQ9NX95 663 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 FRMPD1Q5SYB0 1578 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 KPNA4O00629 521 aaPredicted RBP6.04□□□□□ -1.44
VCAN-201ENST00000265077 NR5A1Q13285 461 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 NFRKBQ6P4R8 1299 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 PIGOQ8TEQ8 1089 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 FAXDC2Q96IV6 333 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms