RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TMC4Q7Z404 712 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 LONP2Q86WA8 852 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 CROCCP3Q8IVE0 287 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 GPHNQ9NQX3 736 aaPredicted RBP12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 KRT1P04264 644 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 ANTXR2P58335 489 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 FAM47AQ5JRC9 791 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 MEI1Q5TIA1 1274 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 CENPPQ6IPU0 288 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 TLR10Q9BXR5 811 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 UBE2TQ9NPD8 197 aaPredicted RBP12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 ANAPC7Q9UJX3 599 aa12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 MRPL11Q9Y3B7 192 aaKnown RBP12.4□□□□□ -0.42
DNMT3A-201ENST00000264709 EIF3DO15371 548 aaKnown RBP eCLIP12.4□□□□□ -0.43
DNMT3A-201ENST00000264709 POLGP54098 1239 aaPredicted RBP12.4□□□□□ -0.43
DNMT3A-201ENST00000264709 CCDC15Q0P6D6 951 aa12.4□□□□□ -0.43
DNMT3A-201ENST00000264709 OXER1Q8TDS5 423 aa12.4□□□□□ -0.43
DNMT3A-201ENST00000264709 PPP2R3CQ969Q6 453 aa12.4□□□□□ -0.43
DNMT3A-201ENST00000264709 PPP1R14BQ96C90 147 aa12.4□□□□□ -0.43
DNMT3A-201ENST00000264709 LPXNO60711 386 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 BCAMP50895 628 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 ATG9AQ7Z3C6 839 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 EXOC8Q8IYI6 725 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 TEKT3Q9BXF9 490 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 TUBA8Q9NY65 449 aaPredicted RBP12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 PSMD6Q15008 389 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 RCN1Q15293 331 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 SORCS3Q9UPU3 1222 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 CAPN6Q9Y6Q1 641 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 IQCA1LA6NCM1 817 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 GPC4O75487 556 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 PAEPP09466 180 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 TNIP2Q8NFZ5 429 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 SF3A3Q12874 501 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■□□ 16.8
DNMT3A-201ENST00000264709 KRR1Q13601 381 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 MORF4L2Q15014 288 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 TMCO5AQ8N6Q1 288 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 APEX2Q9UBZ4 518 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 IPO11Q9UI26 975 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 LEMD3Q9Y2U8 911 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 APOEP02649 317 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 NLRP10Q86W26 655 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 TIPINQ9BVW5 301 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 ATP6V1C1P21283 382 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 SURF1Q15526 300 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 PDXDC2PQ6P474 469 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 CDY2AQ9Y6F7 541 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 CDY1Q9Y6F8 540 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 BACH1O14867 736 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 FGFR4P22455 802 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 TAF12Q16514 161 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 SLC45A4Q5BKX6 768 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
DNMT3A-201ENST00000264709 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 ELF3P78545 371 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 KRT17Q04695 432 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PPP2R5CQ13362 524 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PASD1Q8IV76 773 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PDZD8Q8NEN9 1154 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 BTBD6Q96KE9 485 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 ZC3H12CQ9C0D7 883 aaKnown RBP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 KIAA0391O15091 583 aaKnown RBP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 EIF2S1P05198 315 aaKnown RBP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 GLI1P08151 1106 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PARP6Q2NL67 630 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 LRRC8BQ6P9F7 803 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 RSBN1LQ6PCB5 846 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 KANSL2Q9H9L4 492 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 DEAF1O75398 565 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PLEKHA8P1O95397 391 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 CNBD1Q8NA66 436 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 A1BGP04217 495 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PICALMQ13492 652 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 TFDP2Q14188 446 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 DRAP1Q14919 205 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 SYCP2LQ5T4T6 812 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PCNX4Q63HM2 1172 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 SPATA20Q8TB22 786 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 TTC1Q99614 292 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 BAG5Q9UL15 447 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PFDN6O15212 129 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 KCNA4P22459 653 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 XIAPP98170 497 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 C16orf89Q6UX73 402 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 TBX3O15119 743 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 CHRNDQ07001 517 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 ZNF572Q7Z3I7 529 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 TRIM50Q86XT4 487 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 IQCKQ8N0W5 287 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 MAB21L3Q8N8X9 362 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 RSPH10B2B2RC85 870 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 CAPN9O14815 690 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 RSPH10BP0C881 870 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 PTPROQ16827 1216 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 MFSD14BQ5SR56 506 aa12.38□□□□□ -0.43
DNMT3A-201ENST00000264709 TMEM139Q8IV31 216 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms