RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 CLDN3O15551 220 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 SGPL1O95470 568 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 ECEL1O95672 775 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 ICAM1P05362 532 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 ATF2P15336 505 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 SEC24CP53992 1094 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 ACTN3Q08043 901 aaPredicted RBP13.48□□□□□ -0.25
HERC6-201ENST00000264346 STXBP2Q15833 593 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 BSPRYQ5W0U4 402 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.48□□□□□ -0.25
HERC6-201ENST00000264346 CASKIN2Q8WXE0 1202 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 TRIM6Q9C030 488 aaPredicted RBP13.48□□□□□ -0.25
HERC6-201ENST00000264346 CXorf56Q9H5V9 222 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 AKT3Q9Y243 479 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 MYH3P11055 1940 aa13.48□□□□□ -0.25
HERC6-201ENST00000264346 MYH7P12883 1935 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 LRRD1A4D1F6 860 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 SLC16A3O15427 465 aaKnown RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 TLR2O60603 784 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 RWDD2BP57060 319 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 SUPT20HL1Q3ZLR7 823 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 SYTL5Q8TDW5 730 aaPredicted RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 MKL1Q969V6 931 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 RIT2Q99578 217 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 SYNJ2BP-COX16A0A087WUM0 186 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 PIK3R2O00459 728 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 VCAM1P19320 739 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 FGFR4P22455 802 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 GLE1Q53GS7 698 aaKnown RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 WDR93Q6P2C0 686 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 ZNF280CQ8ND82 737 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 TARS2Q9BW92 718 aaKnown RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 STMN4Q9H169 189 aaPredicted RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 RAB20Q9NX57 234 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 COX16Q9P0S2 106 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 SIPA1L3O60292 1781 aaPredicted RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 DDX3XO00571 662 aaKnown RBP eCLIP13.47□□□□□ -0.25
HERC6-201ENST00000264346 COMTP21964 271 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 AMPD2Q01433 879 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 PRKCEQ02156 737 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 E2F5Q15329 346 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 CCDC137Q6PK04 289 aaKnown RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 RHPN2Q8IUC4 686 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 MMGT1Q8N4V1 131 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 PAF1Q8N7H5 531 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 MCPH1Q8NEM0 835 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 NEK9Q8TD19 979 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 CDHR1Q96JP9 859 aa13.47□□□□□ -0.25
HERC6-201ENST00000264346 RBAKQ9NYW8 714 aaPredicted RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 AGO2Q9UKV8 859 aaKnown RBP13.47□□□□□ -0.25
HERC6-201ENST00000264346 CASZ1Q86V15 1759 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 PEX10O60683 326 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 PPFIA4O75335 1185 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 NEBLO76041 1014 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 ITGB5P18084 799 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 RRP1BQ14684 758 aaKnown RBP13.46□□□□□ -0.25
HERC6-201ENST00000264346 NSRP1Q9H0G5 558 aaKnown RBP13.46□□□□□ -0.25
HERC6-201ENST00000264346 ACAD9Q9H845 621 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 ZNF302Q9NR11 478 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 INTS9Q9NV88 658 aaKnown RBP13.46□□□□□ -0.25
HERC6-201ENST00000264346 TAS2R14Q9NYV8 317 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 RAB21Q9UL25 225 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 F8VZ95 297 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 GOLGA8MH3BSY2 632 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 RARRES1P49788 294 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 AADACL2Q6P093 401 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 MOXD1Q6UVY6 613 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 PPP1R21Q6ZMI0 780 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 LRRC71Q8N4P6 559 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 TAS1R2Q8TE23 839 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 KCTD10Q9H3F6 313 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 ZWILCHQ9H900 591 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 ITGB4P16144 1822 aa13.46□□□□□ -0.25
HERC6-201ENST00000264346 EIF4E1BA6NMX2 242 aaKnown RBP13.46□□□□□ -0.26
HERC6-201ENST00000264346 TNNC2P02585 160 aa13.46□□□□□ -0.26
HERC6-201ENST00000264346 CDK17Q00537 523 aa13.46□□□□□ -0.26
HERC6-201ENST00000264346 CCDC89Q8N998 374 aa13.46□□□□□ -0.26
HERC6-201ENST00000264346 GDAP1Q8TB36 358 aa13.46□□□□□ -0.26
HERC6-201ENST00000264346 CALN1Q9BXU9 219 aa13.46□□□□□ -0.26
HERC6-201ENST00000264346 IQCGQ9H095 443 aaKnown RBP13.46□□□□□ -0.26
HERC6-201ENST00000264346 TRAF3IP3Q9Y228 551 aa13.46□□□□□ -0.26
HERC6-201ENST00000264346 SGK1O00141 431 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 ATP9AO75110 1047 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 CSDE1O75534 798 aaKnown RBP13.45□□□□□ -0.26
HERC6-201ENST00000264346 MMEP08473 750 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 SCP2P22307 547 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 CUL1Q13616 776 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 LRRC14Q15048 493 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 CDO1Q16878 200 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 SYCP2LQ5T4T6 812 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 SPOPLQ6IQ16 392 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 SLC47A2Q86VL8 602 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 CACNA2D3Q8IZS8 1091 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 C7orf31Q8N865 590 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 TTC16Q8NEE8 873 aa13.45□□□□□ -0.26
HERC6-201ENST00000264346 TEX13BQ9BXU2 312 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms