RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 SAAL1Q96ER3 474 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 THOC1Q96FV9 657 aaKnown RBP17.81■□□□□ 0.44
ZNF541-201ENST00000263351 CCDC17Q96LX7 622 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 ZSWIM1Q9BR11 485 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 INTUQ9ULD6 942 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 TP73O15350 636 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 RPSAP08865 295 aaKnown RBP17.81■□□□□ 0.44
ZNF541-201ENST00000263351 PEX5P50542 639 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 ZKSCAN8Q15776 578 aaPredicted RBP17.81■□□□□ 0.44
ZNF541-201ENST00000263351 PPM1KQ8N3J5 372 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 ANKRD42Q8N9B4 389 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 GDAP1Q8TB36 358 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 KREMEN1Q96MU8 473 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 TRPC6Q9Y210 931 aa17.81■□□□□ 0.44
ZNF541-201ENST00000263351 LTBP1Q14766 1721 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 CLRN2A0PK11 232 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 A8MUI8 341 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 PPP1R12BO60237 982 aaPredicted RBP17.8■□□□□ 0.44
ZNF541-201ENST00000263351 PHF2O75151 1096 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 TRIM37O94972 964 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 ADRB2P07550 413 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 MMP13P45452 471 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 FAM182AQ5T1J6 154 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 HHIPL2Q6UWX4 724 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 KIF2BQ8N4N8 673 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.8■□□□□ 0.44
ZNF541-201ENST00000263351 ZNF577Q9BSK1 485 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 CXorf56Q9H5V9 222 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 INTS9Q9NV88 658 aaKnown RBP17.8■□□□□ 0.44
ZNF541-201ENST00000263351 TBK1Q9UHD2 729 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 TTC7AQ9ULT0 858 aaPredicted RBP17.8■□□□□ 0.44
ZNF541-201ENST00000263351 TRIM33Q9UPN9 1127 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 L3MBTL1Q9Y468 752 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 PFASO15067 1338 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 GOLGA6L10A0A0M3HER8 536 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 CDC25CP30307 473 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 AUHQ13825 339 aaKnown RBP17.8■□□□□ 0.44
ZNF541-201ENST00000263351 KIF22Q14807 665 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 CCDC91Q7Z6B0 441 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 MYCBPQ99417 103 aaPredicted RBP17.8■□□□□ 0.44
ZNF541-201ENST00000263351 BAIAP2L1Q9UHR4 511 aa17.8■□□□□ 0.44
ZNF541-201ENST00000263351 TCP10L2B9ZVM9 353 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 RIPK2O43353 540 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 CLTAP09496 248 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 PRELPP51888 382 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 GSCP56915 257 aaPredicted RBP17.79■□□□□ 0.44
ZNF541-201ENST00000263351 KCNJ2P63252 427 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 SPP2Q13103 211 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 SIX1Q15475 284 aaPredicted RBP17.79■□□□□ 0.44
ZNF541-201ENST00000263351 PNMA8AQ86V59 439 aaPredicted RBP17.79■□□□□ 0.44
ZNF541-201ENST00000263351 PRMT6Q96LA8 375 aaPredicted RBP17.79■□□□□ 0.44
ZNF541-201ENST00000263351 PI4K2AQ9BTU6 479 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 AAASQ9NRG9 546 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 CHST7Q9NS84 486 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 EIF3DO15371 548 aaKnown RBP eCLIP17.79■□□□□ 0.44
ZNF541-201ENST00000263351 CLSTN1O94985 981 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 CDR1P51861 262 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 MPP2Q14168 576 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 TATDN1Q6P1N9 297 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 EXOC3L1Q86VI1 746 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 CBWD2Q8IUF1 395 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 CCDC197Q8NCU1 140 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 EPS8L1Q8TE68 723 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 PRCCQ92733 491 aaPredicted RBP17.79■□□□□ 0.44
ZNF541-201ENST00000263351 NUP85Q9BW27 656 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 FGFR1OP2Q9NVK5 253 aa17.79■□□□□ 0.44
ZNF541-201ENST00000263351 CCT8L1PA6NM43 557 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 CHUKO15111 745 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 SPOPO43791 374 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 GAP43P17677 238 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 SNCBQ16143 134 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 TMEM179Q6ZVK1 233 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 SGSM3Q96HU1 749 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 ZDHHC15Q96MV8 337 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 CSRNP1Q96S65 589 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 WDR11Q9BZH6 1224 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 PNMA3Q9UL41 463 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 ARHGEF35A5YM69 484 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 SLC16A4O15374 487 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 NUDT17P0C025 328 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 CETPP11597 493 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 ADRA2BP18089 450 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 ELF3P78545 371 aaPredicted RBP17.78■□□□□ 0.44
ZNF541-201ENST00000263351 SETQ01105 290 aaPredicted RBP17.78■□□□□ 0.44
ZNF541-201ENST00000263351 PADI6Q6TGC4 694 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 CYP4X1Q8N118 509 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 TMEM117Q9H0C3 514 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 CDC42EP4Q9H3Q1 356 aaKnown RBP17.78■□□□□ 0.44
ZNF541-201ENST00000263351 YY1AP1Q9H869 796 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 COL20A1Q9P218 1284 aa17.78■□□□□ 0.44
ZNF541-201ENST00000263351 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
ZNF541-201ENST00000263351 ITGB5P18084 799 aa17.77■□□□□ 0.44
ZNF541-201ENST00000263351 HOXA7P31268 230 aaPredicted RBP17.77■□□□□ 0.44
ZNF541-201ENST00000263351 VAMP7P51809 220 aa17.77■□□□□ 0.44
ZNF541-201ENST00000263351 HP1BP3Q5SSJ5 553 aaPredicted RBP17.77■□□□□ 0.44
ZNF541-201ENST00000263351 LMBRD2Q68DH5 695 aaPredicted RBP17.77■□□□□ 0.44
ZNF541-201ENST00000263351 MIGA2Q7L4E1 593 aa17.77■□□□□ 0.44
ZNF541-201ENST00000263351 HEMGNQ9BXL5 484 aa17.77■□□□□ 0.44
ZNF541-201ENST00000263351 GLT8D2Q9H1C3 349 aa17.77■□□□□ 0.44
ZNF541-201ENST00000263351 SORBS3O60504 671 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms