RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 EXOC3L4Q17RC7 722 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 TSR1Q2NL82 804 aaKnown RBP14.17□□□□□ -0.14
VAMP7-201ENST00000262640 GNASQ5JWF2 1037 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 MFSD14AQ96MC6 490 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 MTG1Q9BT17 334 aaPredicted RBP14.17□□□□□ -0.14
VAMP7-201ENST00000262640 FZD8Q9H461 694 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 MYADML2A6NDP7 307 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 INO80B-WBP1J3KQ70 363 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 ACKR2O00590 384 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 LDHAP00338 332 aaKnown RBP14.17□□□□□ -0.14
VAMP7-201ENST00000262640 VTNP04004 478 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 EDN1P05305 212 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 TRIM49P0CI25 452 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 TRIM49CP0CI26 452 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 PRMT2P55345 433 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 CDC42EP1Q00587 391 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 MBTD1Q05BQ5 628 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 MAP3K21Q5TCX8 1036 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 ZNF410Q86VK4 478 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 KIAA0319LQ8IZA0 1049 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 TMC2Q8TDI7 906 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 CRACR2AQ9BSW2 395 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 INO80BQ9C086 356 aaPredicted RBP14.17□□□□□ -0.14
VAMP7-201ENST00000262640 PLCB1Q9NQ66 1216 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 PRMT7Q9NVM4 692 aaPredicted RBP14.17□□□□□ -0.14
VAMP7-201ENST00000262640 CEP72Q9P209 647 aa14.17□□□□□ -0.14
VAMP7-201ENST00000262640 AGO2Q9UKV8 859 aaKnown RBP14.17□□□□□ -0.14
VAMP7-201ENST00000262640 A0A0B4J269 797 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 SMIM35A0A1B0GVV1 85 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 TOM1L1O75674 476 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 CCND3P30281 292 aaPredicted RBP14.16□□□□□ -0.14
VAMP7-201ENST00000262640 CYP24A1Q07973 514 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 FAM187BQ17R55 369 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 ZNF296Q8WUU4 475 aaPredicted RBP14.16□□□□□ -0.14
VAMP7-201ENST00000262640 ACO2Q99798 780 aaKnown RBP14.16□□□□□ -0.14
VAMP7-201ENST00000262640 MSTO1Q9BUK6 570 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 IFT122Q9HBG6 1241 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 XPNPEP3Q9NQH7 507 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 AGPAT5Q9NUQ2 364 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 USP20Q9Y2K6 914 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 A0A087WZ62 844 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 ZNF233A6NK53 670 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 EPHB6O15197 1021 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 P4HA2O15460 535 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 CLDN3O15551 220 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 PGK1P00558 417 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 GNAT1P11488 350 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 MATR3P43243 847 aaKnown RBP eCLIP14.16□□□□□ -0.143e-6■■■■□ 23.9
VAMP7-201ENST00000262640 ADAM17P78536 824 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 MYL7Q01449 175 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 PRPF4BQ13523 1007 aaKnown RBP14.16□□□□□ -0.14
VAMP7-201ENST00000262640 FDXACB1Q9BRP7 624 aaPredicted RBP14.16□□□□□ -0.14
VAMP7-201ENST00000262640 FAM213AQ9BRX8 229 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 GCNT4Q9P109 453 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 ANKFY1Q9P2R3 1169 aa14.16□□□□□ -0.14
VAMP7-201ENST00000262640 C17orf102A2RUQ5 167 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 ADAMTS4O75173 837 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 NOL4O94818 638 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 CYP2C9P11712 490 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 PON1P27169 355 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 GPC3P51654 580 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 CYP26C1Q6V0L0 522 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 TSHZ1Q6ZSZ6 1077 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 CACNA2D4Q7Z3S7 1137 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 TMTC1Q8IUR5 882 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 C7orf31Q8N865 590 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 PLEKHO2Q8TD55 490 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 PARD3BQ8TEW8 1205 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 NLRP7Q8WX94 980 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 ZNF668Q96K58 619 aaPredicted RBP14.15□□□□□ -0.14
VAMP7-201ENST00000262640 ZBTB45Q96K62 511 aaPredicted RBP14.15□□□□□ -0.14
VAMP7-201ENST00000262640 HAPLN2Q9GZV7 340 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 ZNHIT6Q9NWK9 470 aaKnown RBP14.15□□□□□ -0.14
VAMP7-201ENST00000262640 PMM2O15305 246 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 HOXC8P31273 242 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 DLG4P78352 724 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 CETN1Q12798 172 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 CBWD6Q4V339 395 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 CBWD3Q5JTY5 395 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 CBWD5Q5RIA9 395 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 C1orf220Q5T0J3 134 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 SRGAP1Q7Z6B7 1085 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 SLAIN1Q8ND83 568 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 PRIMPOLQ96LW4 560 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 SCLT1Q96NL6 688 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 NUCKS1Q9H1E3 243 aaKnown RBP14.15□□□□□ -0.14
VAMP7-201ENST00000262640 GANQ9H2C0 597 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 MINDY3Q9H8M7 445 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 RRAGDQ9NQL2 400 aaPredicted RBP14.15□□□□□ -0.14
VAMP7-201ENST00000262640 KCND1Q9NSA2 647 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 SPTLC3Q9NUV7 552 aa14.15□□□□□ -0.14
VAMP7-201ENST00000262640 TTLL13PA6NNM8 815 aa14.14□□□□□ -0.15
VAMP7-201ENST00000262640 SLC9A1P19634 815 aa14.14□□□□□ -0.15
VAMP7-201ENST00000262640 CST5P28325 142 aaPredicted RBP14.14□□□□□ -0.15
VAMP7-201ENST00000262640 GTF2H1P32780 548 aa14.14□□□□□ -0.15
VAMP7-201ENST00000262640 NLRP11P59045 1033 aaKnown RBP14.14□□□□□ -0.15
VAMP7-201ENST00000262640 MCL1Q07820 350 aa14.14□□□□□ -0.15
VAMP7-201ENST00000262640 NOLC1Q14978 699 aaKnown RBP eCLIP14.14□□□□□ -0.15
VAMP7-201ENST00000262640 MEA1Q16626 185 aa14.14□□□□□ -0.15
VAMP7-201ENST00000262640 ATF7IP2Q5U623 682 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms