RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 C1orf146Q5VVC0 180 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 C2orf40Q9H1Z8 148 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 RFX7Q2KHR2 1363 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 MCF2P10911 925 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 LCP1P13796 627 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 ADORA2BP29275 332 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 YWHABP31946 246 aaKnown RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 HADHAP40939 763 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 RBBP7Q16576 425 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 CCDC144BQ3MJ40 725 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 SHC4Q6S5L8 630 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 C2orf69Q8N8R5 385 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 RAPGEF5Q92565 580 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 HNRNPCL2B2RXH8 293 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 DFFAO00273 331 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 HNRNPCL1O60812 293 aaKnown RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 HNRNPH2P55795 449 aaKnown RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 ATP2C1P98194 919 aaPredicted RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 DEUP1Q05D60 604 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 APOBEC3FQ8IUX4 373 aaKnown RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 TRIML2Q8N7C3 387 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 MS4A14Q96JA4 679 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 SP110Q9HB58 689 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 GMNCA6NCL1 334 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 GUCY1A2P33402 732 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 RECQLP46063 649 aaPredicted RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 MORF4L2Q15014 288 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 QRICH1Q2TAL8 776 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 ATXN7L3BQ96GX2 97 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 SYCE1LA8MT33 242 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 KIF28PB7ZC32 967 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 PDHA1P08559 390 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 PDIA2Q13087 525 aaKnown RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 NR1H3Q13133 447 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 ZBED8Q8IZ13 594 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 C1orf54Q8WWF1 131 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 DDX47Q9H0S4 455 aaKnown RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 KIF17Q9P2E2 1029 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 SPATA31A3Q5VYP0 1347 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 ATP5HO75947 161 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 SDC4P31431 198 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 SPP2Q13103 211 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 CC2D1AQ6P1N0 951 aaPredicted RBP10.88□□□□□ -0.67
PHF3-201ENST00000262043 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
PHF3-201ENST00000262043 PVALEFA0A1B0GWK0 134 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 FOXN1O15353 648 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 MYBL1P10243 752 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 TFDP2Q14188 446 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 GPD1LQ8N335 351 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 HPS3Q969F9 1004 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 PPP1R36Q96LQ0 422 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 DDX56Q9NY93 547 aaKnown RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 ADA2Q9NZK5 511 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 FBXO40Q9UH90 709 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 A2ML1A8K2U0 1454 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 ATP1A1P05023 1023 aaKnown RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 SCG3Q8WXD2 468 aaKnown RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 ARHGEF1Q92888 912 aaKnown RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 MAGEB5Q9BZ81 275 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 RPAP3Q9H6T3 665 aaPredicted RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 KRT14P02533 472 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 AGO2Q9UKV8 859 aaKnown RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 CDHR2Q9BYE9 1310 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 TRIM49P0CI25 452 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 TRIM49CP0CI26 452 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 CYP19A1P11511 503 aaPredicted RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 DUOXA2Q1HG44 320 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 ANKRD40Q6AI12 368 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 DHX35Q9H5Z1 703 aaKnown RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 SETBP1Q9Y6X0 1596 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 CHRNA3P32297 505 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 RCAN1P53805 252 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 OSBPL5Q9H0X9 879 aaPredicted RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 ECT2Q9H8V3 914 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 ZNF185O15231 689 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 USP11P51784 963 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 PSMC5P62195 406 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 EFTUD2Q15029 972 aaKnown RBP eCLIP10.87□□□□□ -0.675e-6■■■□□ 14.6
PHF3-201ENST00000262043 LRRC14Q15048 493 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 SRBD1Q8N5C6 995 aaKnown RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 ING2Q9H160 280 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 EPC1Q9H2F5 836 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 TULP4Q9NRJ4 1543 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 NEMP1O14524 444 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 ARSEP51690 589 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 NCAPHQ15003 741 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 TRIM72Q6ZMU5 477 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 FRMD5Q7Z6J6 570 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 RHOT1Q8IXI2 618 aa10.87□□□□□ -0.67
PHF3-201ENST00000262043 NOP53Q9NZM5 478 aaKnown RBP10.87□□□□□ -0.67
PHF3-201ENST00000262043 FGFR4P22455 802 aa10.86□□□□□ -0.67
PHF3-201ENST00000262043 PODNQ7Z5L7 613 aa10.86□□□□□ -0.67
PHF3-201ENST00000262043 CCNYL1Q8N7R7 359 aa10.86□□□□□ -0.67
PHF3-201ENST00000262043 MARCH10Q8NA82 808 aaPredicted RBP10.86□□□□□ -0.67
PHF3-201ENST00000262043 SIK2Q9H0K1 926 aa10.86□□□□□ -0.67
PHF3-201ENST00000262043 ADGRB3O60242 1522 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms