RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SLC4A7Q9Y6M7 1214 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 CBX6O95503 412 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 POLR2MP0CAP2 368 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 CNGA1P29973 690 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 ITGA8P53708 1063 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 DLG4P78352 724 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 GPS1Q13098 491 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 RASA3Q14644 834 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 CDO1Q16878 200 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 GPATCH4Q5T3I0 446 aaKnown RBP10.81□□□□□ -0.68
PALB2-201ENST00000261584 CCDC62Q6P9F0 684 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 ZBTB33Q86T24 672 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 ERICH1Q86X53 443 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 LRRC37BQ96QE4 947 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 SLC13A1Q9BZW2 595 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.81□□□□□ -0.68
PALB2-201ENST00000261584 IGSF9BQ9UPX0 1349 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 RPS6KA5O75582 802 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 HSPA9P38646 679 aaKnown RBP10.81□□□□□ -0.68
PALB2-201ENST00000261584 EIF3BP55884 814 aaKnown RBP10.81□□□□□ -0.68
PALB2-201ENST00000261584 SMTNL2Q2TAL5 461 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 PADI6Q6TGC4 694 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 SLC47A2Q86VL8 602 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.81□□□□□ -0.68
PALB2-201ENST00000261584 HAS1Q92839 578 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 NT5C1BQ96P26 610 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 LXNQ9BS40 222 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 IMPG2Q9BZV3 1241 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 PABPC3Q9H361 631 aaKnown RBP10.81□□□□□ -0.68
PALB2-201ENST00000261584 PARP2Q9UGN5 583 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 TTLL3Q9Y4R7 772 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 KRT1P04264 644 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 UBTFL6P0CB48 400 aaPredicted RBP10.81□□□□□ -0.68
PALB2-201ENST00000261584 GIT2Q14161 759 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 C6orf163Q5TEZ5 329 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 IZUMO3Q5VZ72 239 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 LRRN4Q8WUT4 740 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 CDC42EP4Q9H3Q1 356 aaKnown RBP10.81□□□□□ -0.68
PALB2-201ENST00000261584 SLITRK6Q9H5Y7 841 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 CYP4F11Q9HBI6 524 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 SLCO1B3Q9NPD5 702 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 PIK3C2AO00443 1686 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 EML1O00423 815 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 EPHB1P54762 984 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 KDSRQ06136 332 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 MAPK7Q13164 816 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 TMEM270Q6UE05 265 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 CDR2LQ86X02 465 aaPredicted RBP10.8□□□□□ -0.68
PALB2-201ENST00000261584 MTA3Q9BTC8 594 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 C1orf112Q9NSG2 853 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 BANF1O75531 89 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 ZSCAN5DPP0CG00 497 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 ZCCHC18P0CG32 403 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 ATP2A2P16615 1042 aaKnown RBP10.8□□□□□ -0.68
PALB2-201ENST00000261584 ELF3P78545 371 aaPredicted RBP10.8□□□□□ -0.68
PALB2-201ENST00000261584 SKOR1P84550 965 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 GRAPQ13588 217 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 EML3Q32P44 896 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 ARHGEF18Q6ZSZ5 1173 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 CCDC110Q8TBZ0 833 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 GRAPLQ8TC17 118 aaPredicted RBP10.8□□□□□ -0.68
PALB2-201ENST00000261584 RSAD2Q8WXG1 361 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 CFAP36Q96G28 342 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 CCPG1Q9ULG6 757 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 FAM208AQ9UK61 1670 aaKnown RBP10.8□□□□□ -0.68
PALB2-201ENST00000261584 MAN1A1P33908 653 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 ACOT2P49753 483 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 VAMP7P51809 220 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 ORC1Q13415 861 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 SYDE2Q5VT97 1194 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 NT5DC3Q86UY8 548 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 SUGP1Q8IWZ8 645 aaKnown RBP10.8□□□□□ -0.68
PALB2-201ENST00000261584 DNAJC19Q96DA6 116 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 GBP5Q96PP8 586 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 DDX4Q9NQI0 724 aaKnown RBP10.8□□□□□ -0.68
PALB2-201ENST00000261584 DLGAP2Q9P1A6 1054 aa10.8□□□□□ -0.68
PALB2-201ENST00000261584 FAM86B1E9PN63 330 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 FAM86B2P0C5J1 330 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 PIK3CAP42336 1068 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 ECE1P42892 770 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 MTMR2Q13614 643 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 SLMAPQ14BN4 828 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 P3H1Q32P28 736 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 ZSWIM2Q8NEG5 633 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 APEX2Q9UBZ4 518 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 TRPC6Q9Y210 931 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 CSDE1O75534 798 aaKnown RBP10.79□□□□□ -0.68
PALB2-201ENST00000261584 TROVE2P10155 538 aaKnown RBP eCLIP10.79□□□□□ -0.68
PALB2-201ENST00000261584 PRLRP16471 622 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 PDIA2Q13087 525 aaKnown RBP10.79□□□□□ -0.68
PALB2-201ENST00000261584 PDIA5Q14554 519 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 OGFOD1Q8N543 542 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 RUNDC3BQ96NL0 473 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 RBM15Q96T37 977 aaKnown RBP eCLIP10.79□□□□□ -0.68
PALB2-201ENST00000261584 TSC22D3Q99576 134 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 FAM129AQ9BZQ8 928 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 CHST7Q9NS84 486 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 RAB20Q9NX57 234 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 SAE1Q9UBE0 346 aaPredicted RBP10.79□□□□□ -0.68
PALB2-201ENST00000261584 INPP5FQ9Y2H2 1132 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms