RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 A0A0C4DFX4 3053 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 FOXO6A8MYZ6 492 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 ARIH2O95376 493 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 TXNP10599 105 aaKnown RBP9.83□□□□□ -0.84
CKAP2-201ENST00000258607 USP14P54578 494 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 SEMA3FQ13275 785 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 BTNL9Q6UXG8 535 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 DPP9Q86TI2 863 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 SELENOOQ9BVL4 669 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 ASCC2Q9H1I8 757 aaPredicted RBP9.83□□□□□ -0.84
CKAP2-201ENST00000258607 FAM204AQ9H8W3 233 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 JRKLQ9Y4A0 524 aa9.83□□□□□ -0.84
CKAP2-201ENST00000258607 TTI1O43156 1089 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 CDH8P55286 799 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 TRAPPC11Q7Z392 1133 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 CCDC170Q8IYT3 715 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 LNX1Q8TBB1 728 aaPredicted RBP9.82□□□□□ -0.84
CKAP2-201ENST00000258607 C1orf54Q8WWF1 131 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 LPAR1Q92633 364 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 POLR3CQ9BUI4 534 aaPredicted RBP9.82□□□□□ -0.84
CKAP2-201ENST00000258607 MOV10L1Q9BXT6 1211 aaKnown RBP9.82□□□□□ -0.84
CKAP2-201ENST00000258607 FUT8Q9BYC5 575 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 TMEM117Q9H0C3 514 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 SNX24Q9Y343 169 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 PCDHB4Q9Y5E5 795 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 PLS3P13797 630 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 ATF7P17544 494 aaPredicted RBP9.82□□□□□ -0.84
CKAP2-201ENST00000258607 CYP3A7P24462 503 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 ADSSP30520 456 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 STAT5BP51692 787 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 SETQ01105 290 aaPredicted RBP9.82□□□□□ -0.84
CKAP2-201ENST00000258607 EMC2Q15006 297 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 EHBP1Q8NDI1 1231 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 ASAP3Q8TDY4 903 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 PRPF31Q8WWY3 499 aaKnown RBP9.82□□□□□ -0.84
CKAP2-201ENST00000258607 ATP6V0A1Q93050 837 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 CEP63Q96MT8 703 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 GANQ9H2C0 597 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 TUFT1Q9NNX1 390 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 TBX20Q9UMR3 447 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 AFG3L2Q9Y4W6 797 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 ATRNL1Q5VV63 1379 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 ZMYM2Q9UBW7 1377 aa9.82□□□□□ -0.84
CKAP2-201ENST00000258607 F8VZ95 297 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 O00370 1275 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 DAPK3O43293 454 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 IFNB1P01574 187 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 DSG3P32926 999 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 CIITAP33076 1130 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 PLTPP55058 493 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 WHAMMP3Q1A5X7 153 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 CFAP221Q4G0U5 840 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 SV2AQ7L0J3 742 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 OTUD6AQ7L8S5 288 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 CREG2Q8IUH2 290 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 RNF25Q96BH1 459 aaPredicted RBP9.81□□□□□ -0.84
CKAP2-201ENST00000258607 PWWP2AQ96N64 755 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 MTMR12Q9C0I1 747 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 APEX2Q9UBZ4 518 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 CPA4Q9UI42 421 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 TTC7AQ9ULT0 858 aaPredicted RBP9.81□□□□□ -0.84
CKAP2-201ENST00000258607 ATP8A1Q9Y2Q0 1164 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 LY75O60449 1722 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 RAD51CO43502 376 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 GNA14O95837 355 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 PSAPP07602 524 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 UBA1P22314 1058 aaKnown RBP9.81□□□□□ -0.84
CKAP2-201ENST00000258607 SOX5P35711 763 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 GPS2Q13227 327 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 PPP2R5CQ13362 524 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 CDO1Q16878 200 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 SMTNL2Q2TAL5 461 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 CYP4A22Q5TCH4 519 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 FOXR1Q6PIV2 292 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 RSRC2Q7L4I2 434 aaKnown RBP9.81□□□□□ -0.84
CKAP2-201ENST00000258607 HDXQ7Z353 690 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 IRF2BP2Q7Z5L9 587 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 VSIG10LQ86VR7 867 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 TMEM192Q8IY95 271 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 OR5B17Q8NGF7 314 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 CRYGNQ8WXF5 182 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 SYNCQ9H7C4 482 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 CYP26B1Q9NR63 512 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 HOXC10Q9NYD6 342 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 MAGED2Q9UNF1 606 aaPredicted RBP9.81□□□□□ -0.84
CKAP2-201ENST00000258607 IVNS1ABPQ9Y6Y0 642 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 TBX3O15119 743 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 THAP12O43422 761 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 GAP43P17677 238 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 MEA1Q16626 185 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 MAP9Q49MG5 647 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 ATP13A4Q4VNC1 1196 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 FAM47CQ5HY64 1035 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 VTI1AQ96AJ9 217 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 SPATC1LQ9H0A9 340 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 METTL14Q9HCE5 456 aaKnown RBP9.81□□□□□ -0.84
CKAP2-201ENST00000258607 RBAKQ9NYW8 714 aaPredicted RBP9.81□□□□□ -0.84
CKAP2-201ENST00000258607 CITO14578 2027 aa9.81□□□□□ -0.84
CKAP2-201ENST00000258607 TCRBV7S2A1N4TA0A589 114 aa9.8□□□□□ -0.84
CKAP2-201ENST00000258607 GOLGA6BA6NDN3 693 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms