RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 HLA-DPA1P20036 260 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 TFDP2Q14188 446 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 CDO1Q16878 200 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 XXYLT1Q8NBI6 393 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 HIPK4Q8NE63 616 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 FAM95CA0A1B0GW59 222 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 K7ERI5 159 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ECM2O94769 699 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 DSG1Q02413 1049 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 KCNH2Q12809 1159 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 YIPF3Q9GZM5 350 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 LMCD1Q9NZU5 365 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 CNOT8Q9UFF9 292 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 DNAJC12Q9UKB3 198 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 MAGED2Q9UNF1 606 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 KIDINS220Q9ULH0 1771 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 HEG1Q9ULI3 1381 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 C16orf96A6NNT2 1141 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 RTN2O75298 545 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 RANBP1P43487 201 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 MRPS15P82914 257 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 GUCY1A3Q02108 690 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ZNF667Q5HYK9 610 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ZBTB33Q86T24 672 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 NOP9Q86U38 636 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 UNC5CLQ8IV45 518 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 LCORLQ8N3X6 602 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SCFD1Q8WVM8 642 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 RFFLQ8WZ73 363 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 TRABDQ9H4I3 376 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 LY9Q9HBG7 655 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 POLE3Q9NRF9 147 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 EHD2Q9NZN4 543 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 LRFN2Q9ULH4 789 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 USP15Q9Y4E8 981 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 IGSF1Q8N6C5 1336 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 OTOFQ9HC10 1997 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 TNPO2O14787 897 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ZBTB5O15062 677 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 PHF2O75151 1096 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ANP32DO95626 131 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 CARSP49589 748 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SZRD1Q7Z422 152 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 RHOT1Q8IXI2 618 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 FMR1NBQ8N0W7 255 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 CDC26Q8NHZ8 85 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 RNF217Q8TC41 542 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 CYGBQ8WWM9 190 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 TLR7Q9NYK1 1049 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 FEM1BQ9UK73 627 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SUFUQ9UMX1 484 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 MTO1Q9Y2Z2 717 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 MON2Q7Z3U7 1717 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 FAM47DPA6NHR8 397 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 DAB1O75553 588 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 EPHB1P54762 984 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 TOB2Q14106 344 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 KPNB1Q14974 876 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 P3H1Q32P28 736 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 HEATR6Q6AI08 1181 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SULF1Q8IWU6 871 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 RCOR2Q8IZ40 523 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ELMOD1Q8N336 334 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SH3TC2Q8TF17 1288 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 CDYLQ9Y232 598 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ZHX2Q9Y6X8 837 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 GNA15P30679 374 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 GPC3P51654 580 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 KCNQ4P56696 695 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 KCNB1Q14721 858 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 RNF219Q5W0B1 726 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 OR6B2Q6IFH4 312 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 TMEM270Q6UE05 265 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 NLRP10Q86W26 655 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 RIBC1Q8N443 379 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 TMEM35BQ8NCS4 154 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 PPHLN1Q8NEY8 458 aaKnown RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ZNF408Q9H9D4 720 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 NSMCE4AQ9NXX6 385 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ZSWIM5Q9P217 1185 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 PSMC3IPQ9P2W1 217 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SLC4A7Q9Y6M7 1214 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 VAMP7P51809 220 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 AP3M2P53677 418 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 DEFA1P59665 94 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 DEFA3P59666 94 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 PDXDC2PQ6P474 469 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SLC30A9Q6PML9 568 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SPATA21Q7Z572 469 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 ZBED8Q8IZ13 594 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 RAPGEF5Q92565 580 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 TIPINQ9BVW5 301 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 GIMAP4Q9NUV9 329 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 NEDD4P46934 1319 aa5.08□□□□□ -1.6
RC3H1-201ENST00000258349 SFNP31947 248 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 KIAA1841Q6NSI8 718 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 PASD1Q8IV76 773 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 GSPT2Q8IYD1 628 aaKnown RBP5.07□□□□□ -1.6
RC3H1-201ENST00000258349 EFHBQ8N7U6 833 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 SLC24A3Q9HC58 644 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms